Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK61275.1 | ABK61670.1 | NT01CX_2078 | NT01CX_2083 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | 0.894 |
| ABK61275.1 | cbiT | NT01CX_2078 | NT01CX_0579 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | precorrin-6B methylase/decarboxylase cbiT/cbiE. | 0.566 |
| ABK61275.1 | cobD | NT01CX_2078 | NT01CX_2082 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.997 |
| ABK61275.1 | cobH | NT01CX_2078 | NT01CX_0582 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | precorrin-8X methylmutase; Identified by match to protein family HMM PF02570. | 0.707 |
| ABK61275.1 | cobI | NT01CX_2078 | NT01CX_0578 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | Precorrin-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.660 |
| ABK61275.1 | cobJ | NT01CX_2078 | NT01CX_0575 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466. | 0.600 |
| ABK61275.1 | cobK | NT01CX_2078 | NT01CX_0574 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715. | 0.467 |
| ABK61275.1 | cobO | NT01CX_2078 | NT01CX_0356 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.972 |
| ABK61275.1 | cobQ | NT01CX_2078 | NT01CX_2081 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.997 |
| ABK61275.1 | cobS | NT01CX_2078 | NT01CX_2079 | Cobinamide kinase; Identified by match to protein family HMM PF02283. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.997 |
| ABK61670.1 | ABK61275.1 | NT01CX_2083 | NT01CX_2078 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Cobinamide kinase; Identified by match to protein family HMM PF02283. | 0.894 |
| ABK61670.1 | cbiT | NT01CX_2083 | NT01CX_0579 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | precorrin-6B methylase/decarboxylase cbiT/cbiE. | 0.585 |
| ABK61670.1 | cobD | NT01CX_2083 | NT01CX_2082 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. | 0.943 |
| ABK61670.1 | cobH | NT01CX_2083 | NT01CX_0582 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | precorrin-8X methylmutase; Identified by match to protein family HMM PF02570. | 0.767 |
| ABK61670.1 | cobI | NT01CX_2083 | NT01CX_0578 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Precorrin-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. | 0.545 |
| ABK61670.1 | cobJ | NT01CX_2083 | NT01CX_0575 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | precorrin-3B C17-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466. | 0.568 |
| ABK61670.1 | cobK | NT01CX_2083 | NT01CX_0574 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715. | 0.517 |
| ABK61670.1 | cobO | NT01CX_2083 | NT01CX_0356 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708. | 0.461 |
| ABK61670.1 | cobQ | NT01CX_2083 | NT01CX_2081 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.992 |
| ABK61670.1 | cobS | NT01CX_2083 | NT01CX_2079 | L-threonine-O-3-phosphate decarboxylase, putative; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01140. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.899 |
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