node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LVIS_1234 | mutS | LVIS_1234 | LVIS_1233 | Calcineurin-like phosphoesterase. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.773 |
LVIS_1234 | queA | LVIS_1234 | LVIS_1229 | Calcineurin-like phosphoesterase. | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.451 |
LVIS_1234 | rny1 | LVIS_1234 | LVIS_1235 | Calcineurin-like phosphoesterase. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.632 |
LVIS_1580 | rny1 | LVIS_1580 | LVIS_1235 | Superfamily II DNA and RNA helicase. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
LVIS_1580 | rny2 | LVIS_1580 | LVIS_2112 | Superfamily II DNA and RNA helicase. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
LVIS_1580 | rpsO | LVIS_1580 | LVIS_1392 | Superfamily II DNA and RNA helicase. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
cshA | rny1 | LVIS_0505 | LVIS_1235 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
cshA | rny2 | LVIS_0505 | LVIS_2112 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
cshA | rpsO | LVIS_0505 | LVIS_1392 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
cshB | rny1 | LVIS_1224 | LVIS_1235 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.593 |
cshB | rny2 | LVIS_1224 | LVIS_2112 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
cshB | rpsO | LVIS_1224 | LVIS_1392 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
mutS | LVIS_1234 | LVIS_1233 | LVIS_1234 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Calcineurin-like phosphoesterase. | 0.773 |
mutS | queA | LVIS_1233 | LVIS_1229 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.642 |
mutS | rny1 | LVIS_1233 | LVIS_1235 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.501 |
queA | LVIS_1234 | LVIS_1229 | LVIS_1234 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Calcineurin-like phosphoesterase. | 0.451 |
queA | mutS | LVIS_1229 | LVIS_1233 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.642 |
queA | rny1 | LVIS_1229 | LVIS_1235 | S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase); Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.527 |
rnj | rnj-2 | LVIS_1391 | LVIS_1414 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.909 |
rnj | rny1 | LVIS_1391 | LVIS_1235 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.548 |