STRINGSTRING
ptcA ptcA LVIS_2207 LVIS_2207 aguA-2 aguA-2 LVIS_2209 LVIS_2209 LVIS_2023 LVIS_2023 aguA aguA LVIS_2205 LVIS_2205 arcA arcA LVIS_0829 LVIS_0829 carA carA tyrS-2 tyrS-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptcAOrnithine carbamoyltransferase; Catalyzes the phosphorolysis of N-carbamoylputrescine to form carbamoyl phosphate and putrescine. Is involved in the degradation pathway of the polyamine agmatine. (347 aa)    
Predicted Functional Partners:
LVIS_2207
Carbamate kinase; Belongs to the carbamate kinase family.
 
 0.954
aguA-2
Peptidylarginine deiminase related enzyme.
 
   
 0.907
LVIS_2209
Amino acid transporter.
 
  
 0.900
LVIS_2023
Carbamate kinase; Belongs to the carbamate kinase family.
 
 0.872
aguA
Peptidylarginine deiminase related enzyme.
 
   
 0.864
LVIS_2205
Transcriptional regulator.
 
     0.824
arcA
Arginine deiminase.
 
  
 0.819
LVIS_0829
Carbamoylphosphate synthase large subunit.
 
 0.809
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
 
 
 0.743
tyrS-2
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
     
 0.735
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.