STRINGSTRING
nfuA nfuA Smal_3370 Smal_3370 Smal_1538 Smal_1538 Smal_1552 Smal_1552 nuoI nuoI Smal_2286 Smal_2286 Smal_2672 Smal_2672 Smal_1361 Smal_1361 Smal_1374 Smal_1374 Smal_3046 Smal_3046 edd edd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
nfuAHesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (199 aa)    
Predicted Functional Partners:
Smal_3370
TIGRFAM: glutaredoxin-like protein; PFAM: HesB/YadR/YfhF-family protein; Rhodanese domain protein; glutaredoxin; KEGG: xom:XOO_0988 glutaredoxin-like protein.
  
 0.989
Smal_1538
KEGG: xcb:XC_1985 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.928
Smal_1552
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: xac:XAC2524 ferredoxin.
  
  
 0.891
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.891
Smal_2286
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: xom:XOO_4187 oxidoreductase.
  
 
 0.787
Smal_2672
KEGG: xcv:XCV2430 hypothetical protein.
       0.782
Smal_1361
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.777
Smal_1374
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: xcb:XC_1616 hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
 0.768
Smal_3046
PFAM: glutaredoxin 2; KEGG: xom:XOO_1720 hypothetical protein.
 
  
 0.754
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.744
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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