STRINGSTRING
rbsD rbsD rbsK rbsK Aave_4198 Aave_4198 Aave_4196 Aave_4196 Aave_4197 Aave_4197 Aave_2255 Aave_2255 Aave_4199 Aave_4199 Aave_2250 Aave_2250 Aave_2249 Aave_2249 Aave_2251 Aave_2251 Aave_0861 Aave_0861
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsDRbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (130 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.989
Aave_4198
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: ppu:PP_2456 ribose ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.978
Aave_4196
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_2019 ribose ABC transporter, periplasmic ribose-binding protein; TC 3.A.1.2.-.
 
  
 0.974
Aave_4197
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits; TC 3.A.1.2.-.
 
  
 0.950
Aave_2255
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_I2342 periplasmic ribose-binding protein; TC 3.A.1.2.-.
 
  
 0.900
Aave_4199
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pfl:PFL_2104 ribose operon repressor.
 
  
 0.862
Aave_2250
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bcn:Bcen_5625 inner-membrane translocator; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.860
Aave_2249
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bte:BTH_I2345 ribose ABC transporter, permease protein; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.856
Aave_2251
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5626 ABC transporter-related protein; TC 3.A.1.2.-.
 
  
 0.786
Aave_0861
PFAM: PfkB domain protein; KEGG: pol:Bpro_1103 PfkB.
  
  
 0.774
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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