STRINGSTRING
Cmaq_1209 Cmaq_1209 Cmaq_1924 Cmaq_1924 radA radA Cmaq_1172 Cmaq_1172 Cmaq_1210 Cmaq_1210 Cmaq_1211 Cmaq_1211 Cmaq_1117 Cmaq_1117 Cmaq_0933 Cmaq_0933 Cmaq_0673 Cmaq_0673 Cmaq_0846 Cmaq_0846 Cmaq_0224 Cmaq_0224
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Cmaq_1209PFAM: molybdopterin binding domain; KEGG: tvo:TVN0585 competence/damage-inducible protein CinA N-terminal domain; Belongs to the CinA family. (257 aa)    
Predicted Functional Partners:
Cmaq_1924
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sso:SSO0556 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putataive; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.742
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
 
  
 0.685
Cmaq_1172
TIGRFAM: isopropylmalate/isohomocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sso:SSO0723 3-isopropylmalate dehydrogenase.
      0.663
Cmaq_1210
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pai:PAE0315 ABC-2 type transport system ATP-binding protein.
       0.546
Cmaq_1211
KEGG: pis:Pisl_1969 ABC-2 type transporter.
       0.534
Cmaq_1117
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
     
 0.465
Cmaq_0933
PFAM: Quinolinate phosphoribosyl transferase; KEGG: pis:Pisl_0389 quinolinate phosphoribosyl transferase.
  
  
 0.436
Cmaq_0673
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sai:Saci_0247 D-isomer specific 2-hydroxyacid dehydrogenase.
  
    0.415
Cmaq_0846
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pai:PAE1038 D-3-phosphoglycerate dehydrogenase.
  
    0.415
Cmaq_0224
Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
     
 0.410
Your Current Organism:
Caldivirga maquilingensis
NCBI taxonomy Id: 397948
Other names: C. maquilingensis IC-167, Caldivirga maquilingensis DSM 13496, Caldivirga maquilingensis IC-167, Caldivirga maquilingensis JCM 10307, Caldivirga maquilingensis str. IC-167, Caldivirga maquilingensis strain IC-167
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