rplI protein (Paraburkholderia phytofirmans)

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Score

rplI

Ribosomal protein L9; Binds to the 23S rRNA. (150 aa)

Predicted Functional Partners:

rpsR

0.997

rpsF

0.996

rplS

0.991

rplU

0.991

rplD

0.991

rplT

0.990

rplL

0.990

rplY

0.989

rplM

0.989

rplQ

0.989

Your Current Organism:

Paraburkholderia phytofirmans

NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplD	rplI	Bphyt_3643	Bphyt_1789	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L9; Binds to the 23S rRNA.	0.991
rplD	rplL	Bphyt_3643	Bphyt_3653	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.993
rplD	rplM	Bphyt_3643	Bphyt_3354	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplD	rplQ	Bphyt_3643	Bphyt_3617	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	PFAM: ribosomal protein L17; KEGG: bxe:Bxe_A0341 50S ribosomal protein L17.	0.994
rplD	rplS	Bphyt_3643	Bphyt_2974	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.990
rplD	rplT	Bphyt_3643	Bphyt_2753	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.992
rplD	rplU	Bphyt_3643	Bphyt_3449	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
rplD	rplY	Bphyt_3643	Bphyt_0584	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.983
rplD	rpsF	Bphyt_3643	Bphyt_1786	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.988
rplD	rpsR	Bphyt_3643	Bphyt_1788	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.990
rplI	rplD	Bphyt_1789	Bphyt_3643	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.991
rplI	rplL	Bphyt_1789	Bphyt_3653	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.990
rplI	rplM	Bphyt_1789	Bphyt_3354	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.989
rplI	rplQ	Bphyt_1789	Bphyt_3617	Ribosomal protein L9; Binds to the 23S rRNA.	PFAM: ribosomal protein L17; KEGG: bxe:Bxe_A0341 50S ribosomal protein L17.	0.989
rplI	rplS	Bphyt_1789	Bphyt_2974	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.991
rplI	rplT	Bphyt_1789	Bphyt_2753	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.990
rplI	rplU	Bphyt_1789	Bphyt_3449	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.991
rplI	rplY	Bphyt_1789	Bphyt_0584	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.989
rplI	rpsF	Bphyt_1789	Bphyt_1786	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.996
rplI	rpsR	Bphyt_1789	Bphyt_1788	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.997