STRINGSTRING
Spea_3114 Spea_3114 Spea_3116 Spea_3116 Spea_3115 Spea_3115 Spea_0074 Spea_0074 Spea_1341 Spea_1341 metK metK Spea_1644 Spea_1644
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spea_3114PFAM: protein of unknown function DUF520; KEGG: sbm:Shew185_3601 protein of unknown function DUF520; Belongs to the UPF0234 family. (161 aa)    
Predicted Functional Partners:
Spea_3116
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.595
Spea_3115
PFAM: VanZ family protein; KEGG: slo:Shew_2894 VanZ family protein.
       0.594
Spea_0074
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: shw:Sputw3181_0472 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.567
Spea_1341
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sbl:Sbal_2946 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.567
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.474
Spea_1644
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sdn:Sden_2449 PHP-like protein.
 
   
 0.415
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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