node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Glov_1245 | Glov_3293 | Glov_1245 | Glov_3293 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ppd:Ppro_3437 flagellar motor switch protein FliM. | 0.624 |
Glov_1245 | aspS | Glov_1245 | Glov_1622 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.653 |
Glov_1245 | msrA | Glov_1245 | Glov_1246 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.639 |
Glov_1245 | rplM | Glov_1245 | Glov_3191 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.576 |
Glov_1245 | rplS | Glov_1245 | Glov_2455 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.693 |
Glov_1245 | rpmF | Glov_1245 | Glov_1941 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ppd:Ppro_1740 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.602 |
Glov_1245 | ruvA | Glov_1245 | Glov_1248 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.783 |
Glov_1245 | ruvC | Glov_1245 | Glov_1247 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.796 |
Glov_1245 | tsf | Glov_1245 | Glov_2709 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.575 |
Glov_1245 | ychF | Glov_1245 | Glov_2592 | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.636 |
Glov_3293 | Glov_1245 | Glov_3293 | Glov_1245 | PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: ppd:Ppro_3437 flagellar motor switch protein FliM. | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | 0.624 |
aspS | Glov_1245 | Glov_1622 | Glov_1245 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | 0.653 |
aspS | rplM | Glov_1622 | Glov_3191 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.510 |
aspS | rpmF | Glov_1622 | Glov_1941 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ppd:Ppro_1740 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.586 |
aspS | tsf | Glov_1622 | Glov_2709 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.575 |
aspS | ychF | Glov_1622 | Glov_2592 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.535 |
msrA | Glov_1245 | Glov_1246 | Glov_1245 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | 0.639 |
msrA | ruvA | Glov_1246 | Glov_1248 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.784 |
msrA | ruvC | Glov_1246 | Glov_1247 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.784 |
rplM | Glov_1245 | Glov_3191 | Glov_1245 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: protein of unknown function DUF28; KEGG: ppd:Ppro_2673 hypothetical protein. | 0.576 |