STRINGSTRING
der der cmk cmk gpsA gpsA dnaG dnaG Glov_2728 Glov_2728 Glov_3441 Glov_3441 ftsY ftsY secA secA era era Glov_0274 Glov_0274 Glov_3115 Glov_3115
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
derSmall GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (449 aa)    
Predicted Functional Partners:
cmk
KEGG: gur:Gura_1465 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region.
  
 0.983
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ppd:Ppro_0007 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.957
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.912
Glov_2728
Pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ppd:Ppro_2070 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.911
Glov_3441
TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: ppd:Ppro_3506 GTP-binding protein TypA.
 
  
 0.800
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
 
   
 0.764
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
 
  
 0.762
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
   
0.743
Glov_0274
PFAM: zinc finger CHC2-family protein; KEGG: ppd:Ppro_0215 zinc finger, CHC2-family protein.
  
  
 0.732
Glov_3115
TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; Primase 2; KEGG: ppd:Ppro_1367 phage/plasmid primase, P4 family.
  
  
 0.732
Your Current Organism:
Geobacter lovleyi
NCBI taxonomy Id: 398767
Other names: G. lovleyi SZ, Geobacter lovleyi SZ, Geobacter lovleyi str. SZ, Geobacter lovleyi strain SZ
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