node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rpic_1001 | nusA | Rpic_1001 | Rpic_1116 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.790 |
Rpic_1001 | nusB | Rpic_1001 | Rpic_0660 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.811 |
Rpic_1001 | nusG | Rpic_1001 | Rpic_3319 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.817 |
Rpic_1001 | rpoA | Rpic_1001 | Rpic_3271 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.661 |
Rpic_1001 | rpoZ | Rpic_1001 | Rpic_2275 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.729 |
Rpic_1001 | rpsJ | Rpic_1001 | Rpic_3298 | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.704 |
Rpic_1195 | fmt | Rpic_1195 | Rpic_3677 | PFAM: formyl transferase domain protein; KEGG: rso:RSc1320 hypothetical protein. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.913 |
Rpic_1195 | nusB | Rpic_1195 | Rpic_0660 | PFAM: formyl transferase domain protein; KEGG: rso:RSc1320 hypothetical protein. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.794 |
fmt | Rpic_1195 | Rpic_3677 | Rpic_1195 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | PFAM: formyl transferase domain protein; KEGG: rso:RSc1320 hypothetical protein. | 0.913 |
fmt | nusA | Rpic_3677 | Rpic_1116 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.458 |
fmt | nusB | Rpic_3677 | Rpic_0660 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.830 |
fmt | nusG | Rpic_3677 | Rpic_3319 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.401 |
nusA | Rpic_1001 | Rpic_1116 | Rpic_1001 | NusA antitermination factor; Participates in both transcription termination and antitermination. | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | 0.790 |
nusA | fmt | Rpic_1116 | Rpic_3677 | NusA antitermination factor; Participates in both transcription termination and antitermination. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.458 |
nusA | nusB | Rpic_1116 | Rpic_0660 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.928 |
nusA | nusG | Rpic_1116 | Rpic_3319 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.988 |
nusA | rpoA | Rpic_1116 | Rpic_3271 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
nusA | rpoZ | Rpic_1116 | Rpic_2275 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.961 |
nusA | rpsJ | Rpic_1116 | Rpic_3298 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.974 |
nusB | Rpic_1001 | Rpic_0660 | Rpic_1001 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | PFAM: inositol monophosphatase; KEGG: rso:RSc1160 probable inositol monophosphatase (extragenic suppressor protein). | 0.811 |