STRINGSTRING
tusA tusA Ssed_2135 Ssed_2135 iscS iscS Ssed_2436 Ssed_2436 Ssed_0019 Ssed_0019 Ssed_3126 Ssed_3126 Ssed_4198 Ssed_4198 Ssed_4399 Ssed_4399 Ssed_3254 Ssed_3254 Ssed_3727 Ssed_3727 Ssed_3725 Ssed_3725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tusASirA family protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. (81 aa)    
Predicted Functional Partners:
Ssed_2135
KEGG: slo:Shew_2015 DsrE family protein.
 
 
 0.979
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.977
Ssed_2436
KEGG: slo:Shew_1842 SirA family protein; Belongs to the sulfur carrier protein TusA family.
     
  0.900
Ssed_0019
KEGG: she:Shewmr4_0012 hypothetical protein.
  
    0.734
Ssed_3126
KEGG: mgm:Mmc1_1103 DsrE family protein.
  
  
 0.652
Ssed_4198
KEGG: sbl:Sbal_4066 DsrE family protein.
  
  
 0.652
Ssed_4399
KEGG: slo:Shew_0090 molybdopterin converting factor, subunit 1.
 
 
 
 0.628
Ssed_3254
KEGG: pha:PSHAa1481 hypothetical protein.
  
  
 0.562
Ssed_3727
KEGG: aha:AHA_1691 NADH dehydrogenase.
 
  
 0.560
Ssed_3725
KEGG: slo:Shew_0731 protein of unknown function DUF395, YeeE/YedE.
  
  
 0.540
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.