STRINGSTRING
RPL15 RPL15 RPS21 RPS21 FAU FAU Rps19 Rps19 EEF2 EEF2 RPS15 RPS15 RACK1 RACK1 RPL28 RPL28 Rpl35a Rpl35a RPL4 RPL4 RPL6 RPL6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)    
Predicted Functional Partners:
RPS21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.999
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Rps19
Ribosomal protein S19.
   
 
 0.999
EEF2
Eukaryotic translation elongation factor 2.
  
 0.999
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
RACK1
Receptor for activated C kinase 1.
   
 
 0.999
RPL28
Ribosomal protein L28.
   
 0.999
Rpl35a
Ribosomal protein L35a.
   
 0.999
RPL4
Ribosomal protein L4.
   
 0.999
RPL6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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