STRINGSTRING
Mboo_1659 Mboo_1659 Mboo_1658 Mboo_1658 Mboo_1660 Mboo_1660 Mboo_1661 Mboo_1661 Mboo_1657 Mboo_1657 Mboo_1662 Mboo_1662 rps15 rps15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1659PFAM: Protein of unknown function DUF555; KEGG: mhu:Mhun_0078 hypothetical protein; Belongs to the UPF0212 family. (112 aa)    
Predicted Functional Partners:
Mboo_1658
PFAM: PfkB domain protein; KEGG: mhu:Mhun_0077 PfkB; Belongs to the carbohydrate kinase PfkB family.
       0.858
Mboo_1660
PFAM: nitroreductase; KEGG: mhu:Mhun_0079 nitroreductase.
       0.727
Mboo_1661
KEGG: mhu:Mhun_0080 hypothetical protein.
       0.727
Mboo_1657
KEGG: mhu:Mhun_0076 hypothetical protein.
       0.646
Mboo_1662
KEGG: mhu:Mhun_0081 hypothetical protein.
       0.453
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mhu:Mhun_2511 ribosomal S13S15-like.
   
    0.440
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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