Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETA_20590 | ETA_27920 | ETA_20590 | ETA_27920 | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | Conserved hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.418 |
ETA_20590 | ETA_28470 | ETA_20590 | ETA_28470 | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | Probable Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | 0.442 |
ETA_20590 | htrB | ETA_20590 | ETA_20600 | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.580 |
ETA_20590 | rluA | ETA_20590 | ETA_07290 | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | Ribosomal large subunit pseudouridine synthase A; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.523 |
ETA_20590 | ydgD | ETA_20590 | ETA_16730 | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | Putative protease YdgD; silverDB:etchr01663; Belongs to the peptidase S1B family. | 0.439 |
ETA_27920 | ETA_20590 | ETA_27920 | ETA_20590 | Conserved hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | 0.418 |
ETA_27920 | ETA_28470 | ETA_27920 | ETA_28470 | Conserved hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | Probable Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | 0.651 |
ETA_28470 | ETA_20590 | ETA_28470 | ETA_20590 | Probable Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | 0.442 |
ETA_28470 | ETA_27920 | ETA_28470 | ETA_27920 | Probable Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | Conserved hypothetical protein; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family. | 0.651 |
htrB | ETA_20590 | ETA_20600 | ETA_20590 | Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | 0.580 |
rluA | ETA_20590 | ETA_07290 | ETA_20590 | Ribosomal large subunit pseudouridine synthase A; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | 0.523 |
ydgD | ETA_20590 | ETA_16730 | ETA_20590 | Putative protease YdgD; silverDB:etchr01663; Belongs to the peptidase S1B family. | Conserved hypothetical protein (UPF0176); silverDB:etchr02047; Belongs to the UPF0176 family. | 0.439 |