Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETA_03080 | ETA_21660 | ETA_03080 | ETA_21660 | Glutamate synthase (NADPH); silverDB:etchr00307. | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | 0.665 |
ETA_21660 | ETA_03080 | ETA_21660 | ETA_03080 | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | Glutamate synthase (NADPH); silverDB:etchr00307. | 0.665 |
ETA_21660 | artP | ETA_21660 | ETA_21680 | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | Arginine transport ATP-binding protein; silverDB:etchr02156. | 0.441 |
ETA_21660 | flgH | ETA_21660 | ETA_20350 | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.535 |
ETA_21660 | ybjP | ETA_21660 | ETA_21670 | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | Putative lipoprotein YbjP; silverDB:etchr02155. | 0.766 |
ETA_21660 | ybjR | ETA_21660 | ETA_21650 | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | 0.893 |
artP | ETA_21660 | ETA_21680 | ETA_21660 | Arginine transport ATP-binding protein; silverDB:etchr02156. | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | 0.441 |
artP | ybjP | ETA_21680 | ETA_21670 | Arginine transport ATP-binding protein; silverDB:etchr02156. | Putative lipoprotein YbjP; silverDB:etchr02155. | 0.550 |
artP | ybjR | ETA_21680 | ETA_21650 | Arginine transport ATP-binding protein; silverDB:etchr02156. | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | 0.427 |
flgH | ETA_21660 | ETA_20350 | ETA_21660 | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | 0.535 |
ybjP | ETA_21660 | ETA_21670 | ETA_21660 | Putative lipoprotein YbjP; silverDB:etchr02155. | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | 0.766 |
ybjP | artP | ETA_21670 | ETA_21680 | Putative lipoprotein YbjP; silverDB:etchr02155. | Arginine transport ATP-binding protein; silverDB:etchr02156. | 0.550 |
ybjP | ybjR | ETA_21670 | ETA_21650 | Putative lipoprotein YbjP; silverDB:etchr02155. | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | 0.728 |
ybjR | ETA_21660 | ETA_21650 | ETA_21660 | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | Conserved hypothetical protein (DUF74); silverDB:etchr02154; Belongs to the UPF0145 family. | 0.893 |
ybjR | artP | ETA_21650 | ETA_21680 | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | Arginine transport ATP-binding protein; silverDB:etchr02156. | 0.427 |
ybjR | ybjP | ETA_21650 | ETA_21670 | Probable N-acetylmuramoyl-L-alanine amidase YbjR; silverDB:etchr02153. | Putative lipoprotein YbjP; silverDB:etchr02155. | 0.728 |