Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplK | rplL | GWCH70_0098 | GWCH70_0101 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.998 |
| rplK | rplQ | GWCH70_0098 | GWCH70_0139 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: gka:GK0134 50S ribosomal protein L17. | 0.995 |
| rplK | rplS | GWCH70_0098 | GWCH70_1093 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
| rplK | rplU | GWCH70_0098 | GWCH70_2542 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| rplK | rpmB | GWCH70_0098 | GWCH70_1072 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: afl:Aflv_1781 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.986 |
| rplK | rpmF | GWCH70_0098 | GWCH70_1006 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: gtn:GTNG_0970 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.993 |
| rplK | rpmI | GWCH70_0098 | GWCH70_2659 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: gka:GK2717 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.993 |
| rplK | rpmJ | GWCH70_0098 | GWCH70_0135 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: gka:GK0130 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.994 |
| rplK | rpsF | GWCH70_0098 | GWCH70_3417 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.994 |
| rplK | rpsP | GWCH70_0098 | GWCH70_1088 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: afl:Aflv_1764 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
| rplL | rplK | GWCH70_0101 | GWCH70_0098 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
| rplL | rplQ | GWCH70_0101 | GWCH70_0139 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: gka:GK0134 50S ribosomal protein L17. | 0.996 |
| rplL | rplS | GWCH70_0101 | GWCH70_1093 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
| rplL | rplU | GWCH70_0101 | GWCH70_2542 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplL | rpmB | GWCH70_0101 | GWCH70_1072 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: afl:Aflv_1781 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.986 |
| rplL | rpmF | GWCH70_0101 | GWCH70_1006 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: gtn:GTNG_0970 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.994 |
| rplL | rpmI | GWCH70_0101 | GWCH70_2659 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: gka:GK2717 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.986 |
| rplL | rpmJ | GWCH70_0101 | GWCH70_0135 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: gka:GK0130 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.989 |
| rplL | rpsF | GWCH70_0101 | GWCH70_3417 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.993 |
| rplL | rpsP | GWCH70_0101 | GWCH70_1088 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: afl:Aflv_1764 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.994 |
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