STRINGSTRING
CJA_0091 CJA_0091 CJA_0090 CJA_0090 proC proC CJA_0088 CJA_0088 CJA_0092 CJA_0092 pilT pilT pilU pilU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJA_0091Conserved hypothetical protein TIGR00251; Identified by match to protein family HMM PF02594; match to protein family HMM TIGR00251; Belongs to the UPF0235 family. (101 aa)    
Predicted Functional Partners:
CJA_0090
Identified by match to protein family HMM PF02325.
 
  
 0.853
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
     
 0.735
CJA_0088
Conserved hypothetical protein TIGR00044; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.677
CJA_0092
Conserved hypothetical protein.
       0.519
pilT
Twitching motility protein; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.
       0.486
pilU
Twitching motility protein PilU; Identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420.
       0.461
Your Current Organism:
Cellvibrio japonicus
NCBI taxonomy Id: 498211
Other names: C. japonicus Ueda107, Cellvibrio japonicus Ueda107, Cellvibrio japonicus str. Ueda107, Cellvibrio japonicus strain Ueda107
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.