STRINGSTRING
ynfN ynfN cspI cspI fryB fryB cspB cspB dicC dicC dicA dicA ynaE ynaE dgt dgt tqsA tqsA ydfR ydfR gnsB gnsB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ynfNQin prophage; cold shock-induced protein. (51 aa)    
Predicted Functional Partners:
cspI
Qin prophage; Cold shock-like protein.
  
    0.912
fryB
Putative enzyme IIB component of PTS; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II FryABC PTS system is involved in fructose transport.
      
 0.901
cspB
Qin prophage; cold shock protein.
   
    0.657
dicC
Repressor protein of division inhibition gene dicB; This protein is a repressor of division inhibition gene dicB.
      
 0.624
dicA
Qin prophage; This protein is a repressor of division inhibition gene dicB.
      
 0.544
ynaE
Cold shock protein, Rac prophage.
   
    0.538
dgt
Deoxyguanosine triphosphate triphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs; Belongs to the dGTPase family. Type 1 subfamily.
      
 0.529
tqsA
Pheromone AI-2 transporter; Controls the transport of the quorum-sensing signal AI-2 either by enhancing its secretion or inhibiting its uptake and consequently represses biofilm formation and motility and affects the global gene expression in biofilms.
   
  
 0.517
ydfR
Qin prophage; uncharacterized protein.
   
    0.471
gnsB
Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation.
  
    0.463
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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