STRINGSTRING
speE speE ACR72416.1 ACR72416.1 ACR72414.1 ACR72414.1 ACR72419.1 ACR72419.1 ACR71092.1 ACR71092.1 aguA aguA ACR71830.1 ACR71830.1 ACR72417.1 ACR72417.1 ACR71060.1 ACR71060.1 rplD rplD trmD trmD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (285 aa)    
Predicted Functional Partners:
ACR72416.1
Hypothetical protein; Psort-B: Cytoplasmic, score:8.87; COG0019 Diaminopimelate decarboxylase; HMMPfam:IPR000183; HMMTigr:IPR005730; superfamily:IPR009006.
  
 0.981
ACR72414.1
Beta-ureidopropionase; Psort-B: Cytoplasmic, score:8.87; COG0388 Predicted amidohydrolase; HMMPfam:IPR003010; Gene3D:IPR003010; superfamily:IPR003010; K01431 beta-ureidopropionase.
  
 
 0.979
ACR72419.1
Lysine decarboxylase; Psort-B: Cytoplasmic, score:8.87; COG1982 Arginine/lysine/ornithine decarboxylases; HMMPfam:IPR000310; HMMPfam:IPR008286; Gene3D:IPR008286; Gene3D:IPR015421; ScanRegExp:IPR000310; superfamily:IPR015424; K01582 lysine decarboxylase.
 
 0.976
ACR71092.1
S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
     
  0.900
aguA
Agmatine deiminase; Psort-B: Unknown cell location; COG2957 Peptidylarginine deiminase and related enzymes; HMMPfam:IPR007466; K10536 agmatine deiminase.
     
 0.823
ACR71830.1
Psort-B: Cytoplasmic, score:8.87; COG1868 Flagellar motor switch protein; HMMPfam:IPR001543; HMMPfam:IPR001689; BlastProDom:IPR001543; HMMTigr:IPR001689; K02416 flagellar motor switch protein FliM.
    
   0.820
ACR72417.1
Saccharopine dehydrogenase (NAD+, L-lysine forming); Psort-B: Cytoplasmic, score:8.87; COG1748 Saccharopine dehydrogenase and related proteins; HMMPfam:IPR005097; K00290 saccharopine dehydrogenase (NAD+, L-lysine forming).
       0.820
ACR71060.1
Lysine decarboxylase; Psort-B: Cytoplasmic, score:8.87; COG1982 Arginine/lysine/ornithine decarboxylases; HMMPfam:IPR000310; HMMPfam:IPR008286; Gene3D:IPR008286; Gene3D:IPR015421; superfamily:IPR015424; K01582 lysine decarboxylase.
  
 0.451
rplD
Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
   
    0.408
trmD
tRNA (guanine-N1-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
   
    0.400
Your Current Organism:
Eubacterium eligens
NCBI taxonomy Id: 515620
Other names: Eubacterium eligens ATCC 27750, [. eligens ATCC 27750, [Eubacterium] eligens ATCC 27750
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