STRINGSTRING
pth pth mfd mfd ychF ychF guaA guaA polA polA prfB prfB ACR72828.1 ACR72828.1 tilS tilS pheT pheT spoVG spoVG rpmA rpmA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pthHypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (186 aa)    
Predicted Functional Partners:
mfd
Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
  
 0.927
ychF
Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
 
  
 0.880
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.732
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.698
prfB
Peptide chain release factor RF-2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
 
  
 0.687
ACR72828.1
Hypothetical protein; Psort-B: Cytoplasmic, score:8.87; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; HMMPfam:IPR001763; HMMPfam:IPR011063; Gene3D:IPR014729; HMMSmart:IPR001763; Belongs to the TtcA family.
  
  
 0.640
tilS
Cell cycle protein MesJ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
    0.632
pheT
phenylalanyl-tRNA synthetase; Psort-B: Cytoplasmic, score:9.98; COG0073 EMAP domain; HMMPfam:IPR002547; HMMPfam:IPR005121; HMMPfam:IPR005146; HMMPfam:IPR005147; Gene3D:IPR005121; Gene3D:IPR005147; Gene3D:IPR012340; HMMTigr:IPR004532; superfamily:IPR005121; superfamily:IPR009061; K01888 phenylalanyl-tRNA synthetase; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.630
spoVG
Stage V sporulation protein G; Could be involved in septation.
     
 0.626
rpmA
Psort-B: Unknown cell location; COG0211 Ribosomal protein L27; HMMPfam:IPR001684; BlastProDom:IPR001684; FPrintScan:IPR001684; HMMPanther:IPR001684; HMMTigr:IPR001684; ScanRegExp:IPR001684; K02899 large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
 
  
 0.610
Your Current Organism:
Eubacterium eligens
NCBI taxonomy Id: 515620
Other names: Eubacterium eligens ATCC 27750, [. eligens ATCC 27750, [Eubacterium] eligens ATCC 27750
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