STRINGSTRING
queC queC queE queE queF queF Cpar_1363 Cpar_1363 Cpar_1361 Cpar_1361 trpA trpA Cpar_1292 Cpar_1292 Cpar_1357 Cpar_1357 Cpar_1365 Cpar_1365 Cpar_1360 Cpar_1360
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
queCexsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (227 aa)    
Predicted Functional Partners:
queE
Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
 
 0.990
queF
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
 
 
 0.984
Cpar_1363
PFAM: Abortive infection protein; KEGG: cte:CT0534 hypothetical protein.
       0.731
Cpar_1361
PFAM: glycosyl transferase family 2; KEGG: cte:CT0536 glycosyl transferase.
       0.726
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.724
Cpar_1292
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cte:CT0782 6-pyruvoyltetrahydropterin synthase.
  
  
 0.700
Cpar_1357
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cte:CT1437 6-pyruvoyl tetrahydrobiopterin synthase, putative.
  
  
 0.700
Cpar_1365
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cte:CT0531 sensor histidine kinase/response regulator.
  
    0.501
Cpar_1360
KEGG: cte:CT1438 hypothetical protein.
       0.484
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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