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rmf rmf Tola_2939 Tola_2939 Tola_0764 Tola_0764 Tola_0393 Tola_0393 Tola_1315 Tola_1315 minE minE rlmL rlmL Tola_1566 Tola_1566 Tola_1420 Tola_1420 Tola_0497 Tola_0497 parC parC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
rmfRibosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. (58 aa)    
Predicted Functional Partners:
Tola_2939
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: asa:ASA_0316 sigma 54 modulation protein/ribosomal protein S30EA.
   
 
 0.927
Tola_0764
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: asa:ASA_2799 ribosome-associated protein Y.
   
 
 0.894
Tola_0393
PFAM: protein of unknown function DUF1249; KEGG: asa:ASA_0526 hypothetical protein.
  
     0.643
Tola_1315
PFAM: YaeQ family protein; KEGG: esa:ESA_03147 hypothetical protein.
   
    0.634
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.632
rlmL
Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.569
Tola_1566
PFAM: Sporulation domain protein; KEGG: asa:ASA_2528 DedD protein.
  
     0.556
Tola_1420
KEGG: asa:ASA_1998 hypothetical protein.
       0.536
Tola_0497
PFAM: protein of unknown function DUF446; KEGG: asa:ASA_3171 hypothetical protein.
  
     0.518
parC
DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
   
    0.483
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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