Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEBP2 | EED | ENSCSAP00000004347 | ENSCSAP00000000026 | AE binding protein 2. | Embryonic ectoderm development. | 0.992 |
AEBP2 | EZH2 | ENSCSAP00000004347 | ENSCSAP00000003315 | AE binding protein 2. | Enhancer of zeste 2 polycomb repressive complex 2 subunit. | 0.997 |
AEBP2 | JARID2 | ENSCSAP00000004347 | ENSCSAP00000003832 | AE binding protein 2. | Jumonji and AT-rich interaction domain containing 2. | 0.999 |
AEBP2 | LOC103221971 | ENSCSAP00000004347 | ENSCSAP00000018748 | AE binding protein 2. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.602 |
AEBP2 | LOC103247785 | ENSCSAP00000004347 | ENSCSAP00000017789 | AE binding protein 2. | Histone H2A; Belongs to the histone H2A family. | 0.984 |
AEBP2 | LOC103247786 | ENSCSAP00000004347 | ENSCSAP00000017790 | AE binding protein 2. | Histone H3; Belongs to the histone H3 family. | 0.906 |
AEBP2 | SUZ12 | ENSCSAP00000004347 | ENSCSAP00000002874 | AE binding protein 2. | SUZ12 polycomb repressive complex 2 subunit. | 0.997 |
CARM1 | EZH2 | ENSCSAP00000003199 | ENSCSAP00000003315 | Coactivator associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | Enhancer of zeste 2 polycomb repressive complex 2 subunit. | 0.444 |
CARM1 | LOC103221971 | ENSCSAP00000003199 | ENSCSAP00000018748 | Coactivator associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.571 |
CARM1 | LOC103247786 | ENSCSAP00000003199 | ENSCSAP00000017790 | Coactivator associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | Histone H3; Belongs to the histone H3 family. | 0.913 |
CBX1 | EZH2 | ENSCSAP00000015496 | ENSCSAP00000003315 | Chromobox 1. | Enhancer of zeste 2 polycomb repressive complex 2 subunit. | 0.438 |
CBX1 | LOC103221971 | ENSCSAP00000015496 | ENSCSAP00000018748 | Chromobox 1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.596 |
CBX1 | LOC103247786 | ENSCSAP00000015496 | ENSCSAP00000017790 | Chromobox 1. | Histone H3; Belongs to the histone H3 family. | 0.902 |
EED | AEBP2 | ENSCSAP00000000026 | ENSCSAP00000004347 | Embryonic ectoderm development. | AE binding protein 2. | 0.992 |
EED | EZH2 | ENSCSAP00000000026 | ENSCSAP00000003315 | Embryonic ectoderm development. | Enhancer of zeste 2 polycomb repressive complex 2 subunit. | 0.999 |
EED | JARID2 | ENSCSAP00000000026 | ENSCSAP00000003832 | Embryonic ectoderm development. | Jumonji and AT-rich interaction domain containing 2. | 0.998 |
EED | LOC103221971 | ENSCSAP00000000026 | ENSCSAP00000018748 | Embryonic ectoderm development. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.775 |
EED | LOC103247785 | ENSCSAP00000000026 | ENSCSAP00000017789 | Embryonic ectoderm development. | Histone H2A; Belongs to the histone H2A family. | 0.902 |
EED | LOC103247786 | ENSCSAP00000000026 | ENSCSAP00000017790 | Embryonic ectoderm development. | Histone H3; Belongs to the histone H3 family. | 0.924 |
EED | SUZ12 | ENSCSAP00000000026 | ENSCSAP00000002874 | Embryonic ectoderm development. | SUZ12 polycomb repressive complex 2 subunit. | 0.999 |
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