STRINGSTRING
TK1248 TK1248 TK1249 TK1249 TK1247 TK1247 TK0929 TK0929 TK1250 TK1250 rps3ae rps3ae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK1248Hypothetical protein, conserved, DUF126 family; Belongs to the UPF0107 family. (133 aa)    
Predicted Functional Partners:
TK1249
Hypothetical protein, conserved, DUF521 family.
 
 
 0.996
TK1247
Membrane-associated metallopeptidase, M50 family.
       0.734
TK0929
3-octaprenyl-4-hydroxybenzoate decarboxylyase.
 
     0.493
TK1250
intein/rRNA intron-related DNA endonuclease.
       0.455
rps3ae
SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
 
     0.403
Your Current Organism:
Thermococcus kodakarensis
NCBI taxonomy Id: 69014
Other names: Pyrococcus sp. (strain KOD1), Pyrococcus sp. KOD1, T. kodakarensis KOD1, Thermococcus kodakaraensis KOD1, Thermococcus kodakarensis KOD1, Thermococcus kodakarensis str. KOD1, Thermococcus kodakarensis strain KOD1
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