STRINGSTRING
ppk ppk Xaut_3126 Xaut_3126 Xaut_2307 Xaut_2307 Xaut_4684 Xaut_4684 ppa ppa Xaut_0836 Xaut_0836 Xaut_2483 Xaut_2483 Xaut_3128 Xaut_3128 Xaut_3129 Xaut_3129 polA polA purN purN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP); Belongs to the polyphosphate kinase 1 (PPK1) family. (726 aa)    
Predicted Functional Partners:
Xaut_3126
PFAM: Ppx/GppA phosphatase; KEGG: bja:bll4121 hypothetical protein.
 
  
 0.972
Xaut_2307
PFAM: protein of unknown function DUF344; KEGG: gur:Gura_2647 protein of unknown function DUF344.
 
  
 0.960
Xaut_4684
PFAM: protein of unknown function DUF344; KEGG: bbt:BBta_1858 hypothetical protein.
 
  
 0.958
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.934
Xaut_0836
PFAM: Ppx/GppA phosphatase; KEGG: mes:Meso_0471 Ppx/GppA phosphatase.
  
 0.864
Xaut_2483
PFAM: protein of unknown function DUF344; KEGG: dar:Daro_3585 protein of unknown function DUF344.
 
   
 0.769
Xaut_3128
KEGG: rpe:RPE_3282 chromosomal replication initiator, DnaA.
     
 0.650
Xaut_3129
PFAM: protein of unknown function UPF0118; KEGG: bmf:BAB1_0733 ATP/GTP-binding protein.
       0.617
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.536
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
      0.528
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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