STRINGSTRING
arid3c arid3c M9MM93_DANRE M9MM93_DANRE pias1b pias1b morf4l1 morf4l1 lin28b lin28b polh polh znf706 znf706 gtf3aa gtf3aa znf407 znf407 igf2bp1 igf2bp1 uacaa uacaa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid3cAT-rich interactive domain-containing protein 3A; Transcription factor. (570 aa)    
Predicted Functional Partners:
M9MM93_DANRE
Si:ch73-211l2.3.
      
 0.744
pias1b
Protein inhibitor of-activated STAT, 1b.
   
 
 0.692
morf4l1
Mortality factor 4-like 1.
   
 
 0.690
lin28b
Lin-28 homolog B (C. elegans).
      
 0.633
polh
Polymerase (DNA directed), eta.
      
 0.619
znf706
Zinc finger protein 706.
      
 0.576
gtf3aa
General transcription factor IIIAa.
    
 
 0.516
znf407
Zinc finger protein 407.
    
 
 0.514
igf2bp1
Insulin-like growth factor 2 mRNA-binding protein 1; RNA-binding factor that recruits target transcripts to cytoplasmic protein-RNA complexes (mRNPs). This transcript 'caging' into mRNPs allows mRNA transport and transient storage. It also modulates the rate and location at which target transcripts encounter the translational apparatus and shields them from endonuclease attacks or microRNA-mediated degradation. Plays a direct role in the transport and translation of transcripts required for axonal regeneration in adult sensory neurons (By similarity). Regulates localized beta- actin/AC [...]
   
  
 0.502
uacaa
Uveal autoantigen with coiled-coil domains and ankyrin repeats a.
    
 
 0.501
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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