STRINGSTRING
ba1l ba1l hbae1.1 hbae1.1 hbae3 hbae3 zgc:163057 zgc:163057 hbaa1 hbaa1 hbae1.2 hbae1.2 hbaa2 hbaa2 hbae5 hbae5 hbae1.3 hbae1.3 bY187G17.1-001 bY187G17.1-001 hbbe3 hbbe3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ba1lBa1 globin, like. (148 aa)    
Predicted Functional Partners:
hbae1.1
Hemoglobin, alpha embryonic 1.1.
  
0.822
hbae3
Hemoglobin alpha embryonic-3; Belongs to the globin family.
  
0.821
zgc:163057
Zgc:163057 protein; Belongs to the globin family.
  
0.820
hbaa1
Hemoglobin subunit alpha; Involved in oxygen transport from gills to the various peripheral tissues.
  
0.814
hbae1.2
Hemoglobin, alpha embryonic 1.1; Belongs to the globin family.
  
0.813
hbaa2
Hemoglobin, alpha adult 2; Belongs to the globin family.
  
0.812
hbae5
Hemoglobin, alpha embryonic 5; Belongs to the globin family.
  
0.799
hbae1.3
Hemoglobin, alpha embryonic 1.3; Belongs to the globin family.
  
0.798
bY187G17.1-001
Novel protein similar to zebrafish hemoglobin alpha-adult 1 (Hbaa1); Belongs to the globin family.
  
0.798
hbbe3
Hemoglobin beta embryonic-3; Belongs to the globin family.
  
0.767
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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