STRINGSTRING
rimK1 rimK1 ABK49085.1 ABK49085.1 ABK48180.1 ABK48180.1 ABK47864.1 ABK47864.1 ABK46784.1 ABK46784.1 ABK46782.1 ABK46782.1 ABK46783.1 ABK46783.1 ABK49024.1 ABK49024.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rimK1TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO0546 ribosomal protein S6 modification protein. (301 aa)    
Predicted Functional Partners:
ABK49085.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO1583 hypothetical protein.
 
     0.771
ABK48180.1
PFAM: protein of unknown function DUF785; KEGG: ppr:PBPRA1108 hypothetical protein.
 
     0.698
ABK47864.1
PFAM: protein of unknown function DUF785; KEGG: ppr:PBPRB0931 hypothetical protein.
 
     0.524
ABK46784.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: son:SO0545 response regulator.
       0.463
ABK46782.1
Multi-sensor signal transduction histidine kinase; KEGG: son:SO0544 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
       0.458
ABK46783.1
PFAM: response regulator receiver; KEGG: son:SO0544.1 hypothetical CheY-homologous receiver domain protein.
       0.458
ABK49024.1
TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: son:SO1647 glutathione-regulated potassium-efflux system protein KefB, putative; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.433
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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