STRINGSTRING
ABK48928.1 ABK48928.1 ABK48929.1 ABK48929.1 agaS agaS ABK48927.1 ABK48927.1 ABK49800.1 ABK49800.1 agaK agaK agaAII agaAII ABK50026.1 ABK50026.1 ABK50025.1 ABK50025.1 lysS lysS ABK48139.1 ABK48139.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK48928.1Oxidoreductase domain protein; Glycosidase. (456 aa)    
Predicted Functional Partners:
ABK48929.1
Transcriptional regulator, DeoR family; PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ppr:PBPRB0140 putative DeoR-family regulatory protein.
 
  
 0.883
agaS
Sugar isomerase (SIS); Involved in the pathway of N-acetyl-D-galactosamine degradation. Catalyzes the conversion of D-galactosamine 6-phosphate (GalN-6-P) to D-tagatofuranose 6-phosphate (Tag-6-P). It can also catalyze the conversion of D-glucosamine 6-phosphate.
 
     0.879
ABK48927.1
PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: ecj:JW3101 tagatose 6-phosphate aldolase 1, kbaZ subunit.
 
     0.826
ABK49800.1
TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: son:SO0694 galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.819
agaK
N-acetylglucosamine kinase; Involved in the pathway of N-acetyl-D-galactosamine degradation. Catalyzes the phosphorylation of N-acetyl-D-galactosamine (GalNAc) to yield D-galactosamine 6-phosphate (GalN-6-P). It can also phosphorylate N-acetylglucosamine (GlcNAc). Belongs to the ROK (NagC/XylR) family.
 
   
 0.813
agaAII
N-acetylglucosamine 6-phosphate deacetylase; Involved in the pathway of N-acetyl-D-galactosamine degradation. Catalyzes the conversion of N-acetyl-D-galactosamine 6- phosphate to D-galactosamine 6-phosphate and acetate. It can also catalyze the conversion of N-acetyl-D-glucosamine 6-phosphate.
 
    0.774
ABK50026.1
KEGG: son:SO0363 hypothetical protein.
 
    0.713
ABK50025.1
PFAM: aminoglycoside phosphotransferase; KEGG: son:SO0364 hypothetical protein.
 
     0.658
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: son:SO0992 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.646
ABK48139.1
PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO2476 polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.635
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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