STRINGSTRING
VIM VIM HLA-DRA HLA-DRA DES DES LOC101012154 LOC101012154 LOC101009667 LOC101009667 NES NES PCYT1A PCYT1A GFAP GFAP LOC101001669 LOC101001669 HLA-DQB1 HLA-DQB1 HLA-DQA1 HLA-DQA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIMVimentin; Belongs to the intermediate filament family. (466 aa)    
Predicted Functional Partners:
HLA-DRA
Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.
    
   0.841
DES
Desmin (Predicted); Belongs to the intermediate filament family.
  
 
 
0.830
LOC101012154
Ig-like domain-containing protein.
    
  0.768
LOC101009667
Ig-like domain-containing protein.
    
  0.768
NES
Nestin; Belongs to the intermediate filament family.
    
 
0.735
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
   
    0.718
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
  
 
0.699
LOC101001669
Ig-like domain-containing protein.
    
  0.665
HLA-DQB1
Major histocompatibility complex, class II, DQ beta 1.
    
  0.655
HLA-DQA1
Major histocompatibility complex, class II, DQ alpha 1; Belongs to the MHC class II family.
    
   0.644
Your Current Organism:
Papio anubis
NCBI taxonomy Id: 9555
Other names: Anubis baboon, Doguera baboon, Kenya baboon, P. anubis, Papio cynocephalus anubis, Papio doguera, Papio hamadryas anubis, Papio hamadryas doguera, baboon, olive baboon
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