Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALPL | BGLAP | ENSPTRP00000074293 | ENSPTRP00000002450 | Alkaline phosphatase. | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | 0.748 |
ALPL | BMP2 | ENSPTRP00000074293 | ENSPTRP00000022701 | Alkaline phosphatase. | Bone morphogenetic protein 2. | 0.570 |
ALPL | COL1A1 | ENSPTRP00000074293 | ENSPTRP00000015952 | Alkaline phosphatase. | Collagen type I alpha 1 chain. | 0.669 |
ALPL | IBSP | ENSPTRP00000074293 | ENSPTRP00000027934 | Alkaline phosphatase. | Integrin binding sialoprotein. | 0.724 |
ALPL | MGP | ENSPTRP00000074293 | ENSPTRP00000090622 | Alkaline phosphatase. | Matrix Gla protein; Associates with the organic matrix of bone and cartilage. | 0.465 |
ALPL | RUNX2 | ENSPTRP00000074293 | ENSPTRP00000065999 | Alkaline phosphatase. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.736 |
ALPL | SPP1 | ENSPTRP00000074293 | ENSPTRP00000092389 | Alkaline phosphatase. | Secreted phosphoprotein 1. | 0.554 |
BGLAP | ALPL | ENSPTRP00000002450 | ENSPTRP00000074293 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Alkaline phosphatase. | 0.748 |
BGLAP | BMP2 | ENSPTRP00000002450 | ENSPTRP00000022701 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Bone morphogenetic protein 2. | 0.704 |
BGLAP | COL1A1 | ENSPTRP00000002450 | ENSPTRP00000015952 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Collagen type I alpha 1 chain. | 0.660 |
BGLAP | GGCX | ENSPTRP00000002450 | ENSPTRP00000020816 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Gamma-glutamyl carboxylase. | 0.847 |
BGLAP | GPRC6A | ENSPTRP00000002450 | ENSPTRP00000049683 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | G protein-coupled receptor class C group 6 member A. | 0.763 |
BGLAP | IBSP | ENSPTRP00000002450 | ENSPTRP00000027934 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Integrin binding sialoprotein. | 0.765 |
BGLAP | MGP | ENSPTRP00000002450 | ENSPTRP00000090622 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Matrix Gla protein; Associates with the organic matrix of bone and cartilage. | 0.717 |
BGLAP | RUNX2 | ENSPTRP00000002450 | ENSPTRP00000065999 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.923 |
BGLAP | SPARC | ENSPTRP00000002450 | ENSPTRP00000029789 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Secreted protein acidic and cysteine rich. | 0.671 |
BGLAP | SPP1 | ENSPTRP00000002450 | ENSPTRP00000092389 | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | Secreted phosphoprotein 1. | 0.672 |
BMP2 | ALPL | ENSPTRP00000022701 | ENSPTRP00000074293 | Bone morphogenetic protein 2. | Alkaline phosphatase. | 0.570 |
BMP2 | BGLAP | ENSPTRP00000022701 | ENSPTRP00000002450 | Bone morphogenetic protein 2. | Osteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. | 0.704 |
BMP2 | COL1A1 | ENSPTRP00000022701 | ENSPTRP00000015952 | Bone morphogenetic protein 2. | Collagen type I alpha 1 chain. | 0.521 |
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