Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAM9 | FUBP3 | ENSPPYP00000020778 | ENSPPYP00000022072 | ADAM metallopeptidase domain 9. | Far upstream element binding protein 3. | 0.497 |
ADAM9 | IMP3 | ENSPPYP00000020778 | ENSPPYP00000007559 | ADAM metallopeptidase domain 9. | IMP U3 small nucleolar ribonucleoprotein 3. | 0.557 |
FBP1 | FUBP1 | ENSPPYP00000021745 | ENSPPYP00000001415 | Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family. | FUBP1 isoform 8. | 0.681 |
FBP1 | FUBP3 | ENSPPYP00000021745 | ENSPPYP00000022072 | Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family. | Far upstream element binding protein 3. | 0.682 |
FBP1 | HNRNPF | ENSPPYP00000021745 | ENSPPYP00000002587 | Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family. | Heterogeneous nuclear ribonucleoprotein F. | 0.485 |
FUBP1 | FBP1 | ENSPPYP00000001415 | ENSPPYP00000021745 | FUBP1 isoform 8. | Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family. | 0.681 |
FUBP1 | FUBP3 | ENSPPYP00000001415 | ENSPPYP00000022072 | FUBP1 isoform 8. | Far upstream element binding protein 3. | 0.575 |
FUBP1 | HNRNPF | ENSPPYP00000001415 | ENSPPYP00000002587 | FUBP1 isoform 8. | Heterogeneous nuclear ribonucleoprotein F. | 0.670 |
FUBP1 | KHDRBS1 | ENSPPYP00000001415 | ENSPPYP00000001850 | FUBP1 isoform 8. | KHDRBS1 isoform 2. | 0.648 |
FUBP1 | PARN | ENSPPYP00000001415 | ENSPPYP00000008052 | FUBP1 isoform 8. | Poly(A)-specific ribonuclease PARN; 3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs and is also used to silence certain maternal mRNAs translationally during oocyte maturation and early embryonic development. Interacts with both the 3'-end poly(A) tail and the 5'-end cap structure during degradation, the interaction with the cap structure being required for an efficient degradation of poly(A) tails. Involved in nonsens [...] | 0.560 |
FUBP1 | PUF60 | ENSPPYP00000001415 | ENSPPYP00000021256 | FUBP1 isoform 8. | Poly(U)-binding-splicing factor PUF60; DNA- and RNA-binding protein, involved in several nuclear processes such as pre-mRNA splicing, apoptosis and transcription regulation. In association with FUBP1 regulates MYC transcription at the P2 promoter through the core-TFIIH basal transcription factor. Acts as a transcriptional repressor through the core-TFIIH basal transcription factor. Represses FUBP1-induced transcriptional activation but not basal transcription. Decreases ERCC3 helicase activity. Is also involved in pre-mRNA splicing. Promotes splicing of an intron with weak 3'-splice si [...] | 0.983 |
FUBP1 | QKI | ENSPPYP00000001415 | ENSPPYP00000019218 | FUBP1 isoform 8. | QKI isoform 3. | 0.430 |
FUBP3 | ADAM9 | ENSPPYP00000022072 | ENSPPYP00000020778 | Far upstream element binding protein 3. | ADAM metallopeptidase domain 9. | 0.497 |
FUBP3 | FBP1 | ENSPPYP00000022072 | ENSPPYP00000021745 | Far upstream element binding protein 3. | Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family. | 0.682 |
FUBP3 | FUBP1 | ENSPPYP00000022072 | ENSPPYP00000001415 | Far upstream element binding protein 3. | FUBP1 isoform 8. | 0.575 |
FUBP3 | HNRNPF | ENSPPYP00000022072 | ENSPPYP00000002587 | Far upstream element binding protein 3. | Heterogeneous nuclear ribonucleoprotein F. | 0.653 |
FUBP3 | IMP3 | ENSPPYP00000022072 | ENSPPYP00000007559 | Far upstream element binding protein 3. | IMP U3 small nucleolar ribonucleoprotein 3. | 0.665 |
FUBP3 | KHDRBS1 | ENSPPYP00000022072 | ENSPPYP00000001850 | Far upstream element binding protein 3. | KHDRBS1 isoform 2. | 0.468 |
FUBP3 | PARN | ENSPPYP00000022072 | ENSPPYP00000008052 | Far upstream element binding protein 3. | Poly(A)-specific ribonuclease PARN; 3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs and is also used to silence certain maternal mRNAs translationally during oocyte maturation and early embryonic development. Interacts with both the 3'-end poly(A) tail and the 5'-end cap structure during degradation, the interaction with the cap structure being required for an efficient degradation of poly(A) tails. Involved in nonsens [...] | 0.569 |
FUBP3 | PUF60 | ENSPPYP00000022072 | ENSPPYP00000021256 | Far upstream element binding protein 3. | Poly(U)-binding-splicing factor PUF60; DNA- and RNA-binding protein, involved in several nuclear processes such as pre-mRNA splicing, apoptosis and transcription regulation. In association with FUBP1 regulates MYC transcription at the P2 promoter through the core-TFIIH basal transcription factor. Acts as a transcriptional repressor through the core-TFIIH basal transcription factor. Represses FUBP1-induced transcriptional activation but not basal transcription. Decreases ERCC3 helicase activity. Is also involved in pre-mRNA splicing. Promotes splicing of an intron with weak 3'-splice si [...] | 0.722 |
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