Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCNO | CDC20B | ENSBTAP00000054256 | ENSBTAP00000029276 | Cyclin O; Belongs to the cyclin family. | Cell division cycle 20B. | 0.811 |
CCNO | DEUP1 | ENSBTAP00000054256 | ENSBTAP00000046462 | Cyclin O; Belongs to the cyclin family. | Deuterosome assembly protein 1. | 0.698 |
CCNO | FOXJ1 | ENSBTAP00000054256 | ENSBTAP00000060307 | Cyclin O; Belongs to the cyclin family. | Forkhead box J1. | 0.654 |
CCNO | LDLRAD1 | ENSBTAP00000054256 | ENSBTAP00000040841 | Cyclin O; Belongs to the cyclin family. | Low density lipoprotein receptor class A domain containing 1. | 0.557 |
CCNO | MCIDAS | ENSBTAP00000054256 | ENSBTAP00000055827 | Cyclin O; Belongs to the cyclin family. | Multicilin; Transcription regulator specifically required for multiciliate cell differentiation. Acts in a multiprotein complex containing E2F4 and E2F5 that binds and activates genes required for centriole biogenesis. Required for the deuterosome-mediated acentriolar pathway. Plays a role in mitotic cell cycle progression by promoting cell cycle exit. Modulates GMNN activity by reducing its affinity for CDT1. | 0.852 |
CCNO | RFX2 | ENSBTAP00000054256 | ENSBTAP00000062095 | Cyclin O; Belongs to the cyclin family. | DNA-binding protein RFX2; Transcription factor that acts as a key regulator of spermatogenesis. Acts by regulating expression of genes required for the haploid phase during spermiogenesis, such as genes required for cilium assembly and function. Recognizes and binds the X-box, a regulatory motif with DNA sequence 5'-GTNRCC(0-3N)RGYAAC-3' present on promoters. Probably activates transcription of the testis-specific histone gene HIST1H1T. | 0.448 |
CCNO | RSPH4A | ENSBTAP00000054256 | ENSBTAP00000015775 | Cyclin O; Belongs to the cyclin family. | Radial spoke head component 4A. | 0.678 |
CCNO | SHISA8 | ENSBTAP00000054256 | ENSBTAP00000060486 | Cyclin O; Belongs to the cyclin family. | Shisa family member 8. | 0.499 |
CDC20B | CCNO | ENSBTAP00000029276 | ENSBTAP00000054256 | Cell division cycle 20B. | Cyclin O; Belongs to the cyclin family. | 0.811 |
CDC20B | DEUP1 | ENSBTAP00000029276 | ENSBTAP00000046462 | Cell division cycle 20B. | Deuterosome assembly protein 1. | 0.669 |
CDC20B | MCIDAS | ENSBTAP00000029276 | ENSBTAP00000055827 | Cell division cycle 20B. | Multicilin; Transcription regulator specifically required for multiciliate cell differentiation. Acts in a multiprotein complex containing E2F4 and E2F5 that binds and activates genes required for centriole biogenesis. Required for the deuterosome-mediated acentriolar pathway. Plays a role in mitotic cell cycle progression by promoting cell cycle exit. Modulates GMNN activity by reducing its affinity for CDT1. | 0.662 |
DEUP1 | CCNO | ENSBTAP00000046462 | ENSBTAP00000054256 | Deuterosome assembly protein 1. | Cyclin O; Belongs to the cyclin family. | 0.698 |
DEUP1 | CDC20B | ENSBTAP00000046462 | ENSBTAP00000029276 | Deuterosome assembly protein 1. | Cell division cycle 20B. | 0.669 |
DEUP1 | FOXJ1 | ENSBTAP00000046462 | ENSBTAP00000060307 | Deuterosome assembly protein 1. | Forkhead box J1. | 0.620 |
DEUP1 | MCIDAS | ENSBTAP00000046462 | ENSBTAP00000055827 | Deuterosome assembly protein 1. | Multicilin; Transcription regulator specifically required for multiciliate cell differentiation. Acts in a multiprotein complex containing E2F4 and E2F5 that binds and activates genes required for centriole biogenesis. Required for the deuterosome-mediated acentriolar pathway. Plays a role in mitotic cell cycle progression by promoting cell cycle exit. Modulates GMNN activity by reducing its affinity for CDT1. | 0.668 |
DEUP1 | RFX2 | ENSBTAP00000046462 | ENSBTAP00000062095 | Deuterosome assembly protein 1. | DNA-binding protein RFX2; Transcription factor that acts as a key regulator of spermatogenesis. Acts by regulating expression of genes required for the haploid phase during spermiogenesis, such as genes required for cilium assembly and function. Recognizes and binds the X-box, a regulatory motif with DNA sequence 5'-GTNRCC(0-3N)RGYAAC-3' present on promoters. Probably activates transcription of the testis-specific histone gene HIST1H1T. | 0.451 |
FOXJ1 | CCNO | ENSBTAP00000060307 | ENSBTAP00000054256 | Forkhead box J1. | Cyclin O; Belongs to the cyclin family. | 0.654 |
FOXJ1 | DEUP1 | ENSBTAP00000060307 | ENSBTAP00000046462 | Forkhead box J1. | Deuterosome assembly protein 1. | 0.620 |
FOXJ1 | GMNC | ENSBTAP00000060307 | ENSBTAP00000066145 | Forkhead box J1. | Geminin coiled-coil domain containing. | 0.455 |
FOXJ1 | LDLRAD1 | ENSBTAP00000060307 | ENSBTAP00000040841 | Forkhead box J1. | Low density lipoprotein receptor class A domain containing 1. | 0.426 |
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