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Si026107m Si026107m Si001298m Si001298m Si022214m Si022214m Si036762m Si036762m Si009603m Si009603m Si000752m Si000752m Si017046m Si017046m Si030212m Si030212m Si021528m Si021528m Si034791m Si034791m Si019445m Si019445m
"Si017046m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si017046mUncharacterized protein (486 aa)    
Predicted Functional Partners:
Si019445m
Acetolactate synthase (643 aa)
 
  0.985
Si021528m
Uncharacterized protein (603 aa)
 
  0.982
Si000752m
Uncharacterized protein (601 aa)
 
  0.982
Si022214m
3-isopropylmalate dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (405 aa)
 
 
  0.980
Si034791m
Uncharacterized protein (600 aa)
   
 
  0.965
Si009603m
Uncharacterized protein (631 aa)
 
 
  0.918
Si026107m
Uncharacterized protein (635 aa)
 
 
  0.918
Si001298m
Uncharacterized protein (472 aa)
   
  0.871
Si036762m
Uncharacterized protein (307 aa)
     
 
  0.827
Si030212m
Uncharacterized protein (373 aa)
     
 
  0.827
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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