STRINGSTRING
MY1_1129 MY1_1129 MY1_1130 MY1_1130 MY1_1131 MY1_1131 MY1_1132 MY1_1132 MY1_1133 MY1_1133 MY1_1134 MY1_1134
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MY1_1129Glyoxalase/bleomycin resistance protein/dioxygenase; COG matches:COG0346; PFAM matches:PF00903. (131 aa)
MY1_1130Methylmalonyl-CoA mutase, large subunit; COG matches:COG1884; PFAM matches:PF01642. (533 aa)
MY1_1131LAO/AO transport system ATPase; COG matches:COG1703; PFAM matches:PF03308. (304 aa)
MY1_1132Hypothetical protein. (134 aa)
MY1_1133Peptidase M1 membrane alanine aminopeptidase; COG matches:COG0308; PFAM matches:PF01433. (831 aa)
MY1_1134Cobalamin B12-binding domain protein; COG matches:COG2185; PFAM matches:PF02310. (140 aa)
Your Current Organism:
Nitrosarchaeum koreense
NCBI taxonomy Id: 1001994
Other names: Candidatus Nitrosoarchaeum koreensis MY1, N. koreense MY1, Nitrosarchaeum koreense MY1, Nitrosopumilus sp. MY1
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