STRINGSTRING
MY1_0024 MY1_0024 MY1_0128 MY1_0128 MY1_0129 MY1_0129 MY1_0228 MY1_0228 MY1_0229 MY1_0229 MY1_0230 MY1_0230 MY1_0231 MY1_0231 MY1_0232 MY1_0232 MY1_0233 MY1_0233 MY1_0234 MY1_0234 MY1_0235 MY1_0235 MY1_0236 MY1_0236 MY1_0237 MY1_0237 MY1_0238 MY1_0238 MY1_0471 MY1_0471 MY1_0716 MY1_0716 MY1_0717 MY1_0717 MY1_0718 MY1_0718 MY1_0719 MY1_0719 MY1_0720 MY1_0720 MY1_0721 MY1_0721 MY1_1661 MY1_1661 MY1_1662 MY1_1662 MY1_1912 MY1_1912
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MY1_0024NAD-dependent epimerase/dehydratase; COG matches:COG1271; PFAM matches:PF01370, PF01073, PF07993. (289 aa)
MY1_0128Cytochrome c oxidase subunit II; COG matches:COG1622; PFAM matches:PF00116. (143 aa)
MY1_0129Cytochrome c oxidase subunit I; COG matches:COG0843; PFAM matches:PF00115. (509 aa)
MY1_0228NADH-ubiquinone oxidoreductase, subunit A; COG matches:COG0838; PFAM matches:PF00507. (124 aa)
MY1_0229NADH-quinone oxidoreductase, B subunit; COG matches:COG0377; PFAM matches:PF01058; Belongs to the complex I 20 kDa subunit family. (174 aa)
MY1_0230NADH-ubiquinone oxidoreductase, subunit C; COG matches:COG0852; PFAM matches:PF00329. (193 aa)
MY1_0231NADH dehydrogenase (Quinone); COG matches:COG0649; PFAM matches:PF00346; Belongs to the complex I 49 kDa subunit family. (378 aa)
MY1_0232NADH dehydrogenase (Quinone); COG matches:COG1005; PFAM matches:PF00146. (432 aa)
MY1_02334Fe-4S ferredoxin iron-sulfur binding domain protein; COG matches:COG1143; PFAM matches:PF00037. (165 aa)
MY1_0234NADH-ubiquinone/plastoquinone oxidoreductase chain 6; COG matches:COG0839; PFAM matches:PF00499. (170 aa)
MY1_0235NADH-ubiquinone oxidoreductase chain 4L; COG matches:COG0713; PFAM matches:PF00420. (87 aa)
MY1_0236Proton-translocating NADH-quinone oxidoreductase, chain M; COG matches:COG0651; PFAM matches:PF00361. (518 aa)
MY1_0237Proton-translocating NADH-quinone oxidoreductase, chain L; COG matches:COG1009; PFAM matches:PF00361. (692 aa)
MY1_0238Proton-translocating NADH-quinone oxidoreductase, chain N; COG matches:COG1007; PFAM matches:PF00361. (494 aa)
MY1_0471NAD-dependent epimerase/dehydratase; COG matches:COG0702; PFAM matches:PF01370, PF05368, PF01073, PF02719. (459 aa)
MY1_0716NADH dehydrogenase (Quinone); COG matches:COG0651; PFAM matches:PF00361. (681 aa)
MY1_0717Hydrogenase, membrane subunit 3-like protein (EchB-like); COG matches:COG0650; PFAM matches:PF00146. (315 aa)
MY1_0718Hydrogenase, membrane subunit 2-like protein; COG matches:COG4237. (220 aa)
MY1_0719Membrane-bound [NiFe]-hydrogenase-4, subunit F-like protein; COG matches:COG0651; PFAM matches:PF00361. (501 aa)
MY1_0720Membrane-bound [NiFe]-hydrogenase-3, large subunit (Chain E)-like protein; COG matches:COG3261; PFAM matches:PF00329, PF00346. (540 aa)
MY1_0721NADH ubiquinone oxidoreductase 20 kDa subunit; COG matches:COG3260; PFAM matches:PF01058. (271 aa)
MY1_1661Cytochrome b/b6 domain-containing protein; COG matches:COG1290; PFAM matches:PF00032. (527 aa)
MY1_1662Rieske (2Fe-2S) domain protein; COG matches:COG0723; PFAM matches:PF00355. (202 aa)
MY1_1912FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG matches:COG1252; PFAM matches:PF07992, PF00070. (452 aa)
Your Current Organism:
Nitrosarchaeum koreense
NCBI taxonomy Id: 1001994
Other names: Candidatus Nitrosoarchaeum koreensis MY1, N. koreense MY1, Nitrosarchaeum koreense MY1, Nitrosopumilus sp. MY1
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