STRINGSTRING
MY1_0237 MY1_0237 MY1_0716 MY1_0716 MY1_0238 MY1_0238 MY1_0236 MY1_0236 MY1_0719 MY1_0719
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MY1_0237Proton-translocating NADH-quinone oxidoreductase, chain L; COG matches:COG1009; PFAM matches:PF00361. (692 aa)
MY1_0716NADH dehydrogenase (Quinone); COG matches:COG0651; PFAM matches:PF00361. (681 aa)
MY1_0238Proton-translocating NADH-quinone oxidoreductase, chain N; COG matches:COG1007; PFAM matches:PF00361. (494 aa)
MY1_0236Proton-translocating NADH-quinone oxidoreductase, chain M; COG matches:COG0651; PFAM matches:PF00361. (518 aa)
MY1_0719Membrane-bound [NiFe]-hydrogenase-4, subunit F-like protein; COG matches:COG0651; PFAM matches:PF00361. (501 aa)
Your Current Organism:
Nitrosarchaeum koreense
NCBI taxonomy Id: 1001994
Other names: Candidatus Nitrosoarchaeum koreensis MY1, N. koreense MY1, Nitrosarchaeum koreense MY1, Nitrosopumilus sp. MY1
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