STRINGSTRING
MY1_1729 MY1_1729 MY1_0167 MY1_0167 MY1_0173 MY1_0173 MY1_0253 MY1_0253 MY1_0254 MY1_0254 tal tal aroA-2 aroA-2 fbp fbp MY1_1273 MY1_1273 MY1_1353 MY1_1353 MY1_1680 MY1_1680 MY1_1879 MY1_1879 MY1_0095 MY1_0095 MY1_0113 MY1_0113
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MY1_1729Aldehyde dehydrogenase; COG matches:COG1012; PFAM matches:PF00171. (467 aa)
MY1_0167Ribose 5-phosphate isomerase; COG matches:COG0120; PFAM matches:PF06026. (224 aa)
MY1_0173Phosphoglucosamine mutase; COG matches:COG1109; PFAM matches:PF02878, PF02880, PF02879, PF00408; Belongs to the phosphohexose mutase family. (456 aa)
MY1_0253Ribulose-phosphate 3-epimerase; COG matches:COG3959; PFAM matches:PF00456, PF00834, PF00676. (555 aa)
MY1_0254Transketolase central region; COG matches:COG3958; PFAM matches:PF02779, PF02780. (324 aa)
talPutative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (223 aa)
aroA-2Putative phospho-2-dehydro-3-deoxyheptonate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids. (262 aa)
fbpFructose-16-bisphosphatase type V archaeal; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). (378 aa)
MY1_1273Hydroxypyruvate reductase; COG matches:COG2379; PFAM matches:PF05161. (425 aa)
MY1_1353Putative Pentapeptide repeats (8 copies); COG matches:COG2133; PFAM matches:PF07995. (469 aa)
MY1_1680Glucose sorbosone dehydrogenase; COG matches:COG2133; PFAM matches:PF07995. (364 aa)
MY1_1879Ribose-phosphate pyrophosphokinase; COG matches:COG0462; PFAM matches:PF00156; Belongs to the ribose-phosphate pyrophosphokinase family. (292 aa)
MY1_0095Putative Pentapeptide repeats (8 copies); COG matches:COG2133; PFAM matches:PF07995. (436 aa)
MY1_0113Glucose-6-phosphate isomerase; COG matches:COG0166; PFAM matches:PF10432. (341 aa)
Your Current Organism:
Nitrosarchaeum koreense
NCBI taxonomy Id: 1001994
Other names: Candidatus Nitrosoarchaeum koreensis MY1, N. koreense MY1, Nitrosarchaeum koreense MY1, Nitrosopumilus sp. MY1
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