29 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Clgn	Calmegin. (611 aa)
	Pdilt	Protein disulfide-isomerase-like protein of the testis. (582 aa)
	Prdx4	Peroxiredoxin-4. (272 aa)
	Pdia6	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family. (436 aa)
	Ankrd45	Ankyrin repeat domain-containing protein 45 isoform X1. (165 aa)
	Dnajc10	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins. (793 aa)
	Txndc11	Thioredoxin domain-containing protein 11 isoform X1. (858 aa)
	Pdia4	Protein disulfide-isomerase A4. (634 aa)
	Ero1lb	ERO1-like protein beta. (440 aa)
	Hsp90b1	Endoplasmin. (804 aa)
	Abcb9	ATP-binding cassette sub-family B member 9 isoform X1. (766 aa)
	Pdia2	Protein disulfide-isomerase A2. (518 aa)
	Tap2	Antigen peptide transporter 2. (704 aa)
	Erp27	Endoplasmic reticulum resident protein 27 isoform X1. (226 aa)
	Mttp	Microsomal triglyceride transfer protein large subunit. (908 aa)
	Calr3	Calreticulin-3 isoform X2. (318 aa)
	Tapbp	Tapasin. (435 aa)
	Pdia3	Protein disulfide-isomerase. (505 aa)
	Txndc5	Thioredoxin domain-containing protein 5; Belongs to the protein disulfide isomerase family. (352 aa)
	LOC106001397	Patr class I histocompatibility antigen, B-1 alpha chain-like; Belongs to the MHC class I family. (273 aa)
	ENSDORP00000017143	annotation not available (235 aa)
	Tap1	Antigen peptide transporter 1. (682 aa)
	Apob	Apolipoprotein B-100. (4414 aa)
	Canx	Calnexin. (560 aa)
	Erp29	Endoplasmic reticulum resident protein 29; Does not seem to be a disulfide isomerase. (293 aa)
	Calr	Calreticulin. (417 aa)
	Calr4	Calreticulin. (396 aa)
	Ero1l	ERO1-like protein alpha. (445 aa)
	Secisbp2l	Selenocysteine insertion sequence-binding protein 2-like isoform X1. (1101 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abcb9	Ankrd45	ENSDORP00000005852	ENSDORP00000003906	ATP-binding cassette sub-family B member 9 isoform X1.	Ankyrin repeat domain-containing protein 45 isoform X1.	0.537
Abcb9	Apob	ENSDORP00000005852	ENSDORP00000018366	ATP-binding cassette sub-family B member 9 isoform X1.	Apolipoprotein B-100.	0.459
Abcb9	Calr	ENSDORP00000005852	ENSDORP00000023014	ATP-binding cassette sub-family B member 9 isoform X1.	Calreticulin.	0.683
Abcb9	Calr3	ENSDORP00000005852	ENSDORP00000012298	ATP-binding cassette sub-family B member 9 isoform X1.	Calreticulin-3 isoform X2.	0.683
Abcb9	Calr4	ENSDORP00000005852	ENSDORP00000024217	ATP-binding cassette sub-family B member 9 isoform X1.	Calreticulin.	0.683
Abcb9	Canx	ENSDORP00000005852	ENSDORP00000020701	ATP-binding cassette sub-family B member 9 isoform X1.	Calnexin.	0.543
Abcb9	Clgn	ENSDORP00000005852	ENSDORP00000000159	ATP-binding cassette sub-family B member 9 isoform X1.	Calmegin.	0.543
Abcb9	LOC106001397	ENSDORP00000005852	ENSDORP00000015976	ATP-binding cassette sub-family B member 9 isoform X1.	Patr class I histocompatibility antigen, B-1 alpha chain-like; Belongs to the MHC class I family.	0.623
Abcb9	Pdia2	ENSDORP00000005852	ENSDORP00000007662	ATP-binding cassette sub-family B member 9 isoform X1.	Protein disulfide-isomerase A2.	0.550
Abcb9	Pdia3	ENSDORP00000005852	ENSDORP00000013563	ATP-binding cassette sub-family B member 9 isoform X1.	Protein disulfide-isomerase.	0.854
Abcb9	Pdia4	ENSDORP00000005852	ENSDORP00000004442	ATP-binding cassette sub-family B member 9 isoform X1.	Protein disulfide-isomerase A4.	0.709
Abcb9	Secisbp2l	ENSDORP00000005852	ENSDORP00000026841	ATP-binding cassette sub-family B member 9 isoform X1.	Selenocysteine insertion sequence-binding protein 2-like isoform X1.	0.499
Abcb9	Tap2	ENSDORP00000005852	ENSDORP00000007800	ATP-binding cassette sub-family B member 9 isoform X1.	Antigen peptide transporter 2.	0.997
Abcb9	Tapbp	ENSDORP00000005852	ENSDORP00000013005	ATP-binding cassette sub-family B member 9 isoform X1.	Tapasin.	0.956
Abcb9	Txndc11	ENSDORP00000005852	ENSDORP00000004422	ATP-binding cassette sub-family B member 9 isoform X1.	Thioredoxin domain-containing protein 11 isoform X1.	0.499
Ankrd45	Abcb9	ENSDORP00000003906	ENSDORP00000005852	Ankyrin repeat domain-containing protein 45 isoform X1.	ATP-binding cassette sub-family B member 9 isoform X1.	0.537
Ankrd45	Calr	ENSDORP00000003906	ENSDORP00000023014	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin.	0.887
Ankrd45	Calr3	ENSDORP00000003906	ENSDORP00000012298	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin-3 isoform X2.	0.887
Ankrd45	Calr4	ENSDORP00000003906	ENSDORP00000024217	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin.	0.887
Ankrd45	Canx	ENSDORP00000003906	ENSDORP00000020701	Ankyrin repeat domain-containing protein 45 isoform X1.	Calnexin.	0.932