7 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Clgn	Calmegin. (611 aa)
	Pdia6	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family. (436 aa)
	Ankrd45	Ankyrin repeat domain-containing protein 45 isoform X1. (165 aa)
	Dnajc10	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins. (793 aa)
	Pdia4	Protein disulfide-isomerase A4. (634 aa)
	Hsp90b1	Endoplasmin. (804 aa)
	Calr4	Calreticulin. (396 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ankrd45	Calr4	ENSDORP00000003906	ENSDORP00000024217	Ankyrin repeat domain-containing protein 45 isoform X1.	Calreticulin.	0.887
Ankrd45	Clgn	ENSDORP00000003906	ENSDORP00000000159	Ankyrin repeat domain-containing protein 45 isoform X1.	Calmegin.	0.932
Ankrd45	Dnajc10	ENSDORP00000003906	ENSDORP00000004102	Ankyrin repeat domain-containing protein 45 isoform X1.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.990
Ankrd45	Hsp90b1	ENSDORP00000003906	ENSDORP00000005189	Ankyrin repeat domain-containing protein 45 isoform X1.	Endoplasmin.	0.987
Ankrd45	Pdia4	ENSDORP00000003906	ENSDORP00000004442	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein disulfide-isomerase A4.	0.898
Ankrd45	Pdia6	ENSDORP00000003906	ENSDORP00000003361	Ankyrin repeat domain-containing protein 45 isoform X1.	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.	0.655
Calr4	Ankrd45	ENSDORP00000024217	ENSDORP00000003906	Calreticulin.	Ankyrin repeat domain-containing protein 45 isoform X1.	0.887
Calr4	Clgn	ENSDORP00000024217	ENSDORP00000000159	Calreticulin.	Calmegin.	0.877
Calr4	Dnajc10	ENSDORP00000024217	ENSDORP00000004102	Calreticulin.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.852
Calr4	Hsp90b1	ENSDORP00000024217	ENSDORP00000005189	Calreticulin.	Endoplasmin.	0.987
Calr4	Pdia4	ENSDORP00000024217	ENSDORP00000004442	Calreticulin.	Protein disulfide-isomerase A4.	0.971
Calr4	Pdia6	ENSDORP00000024217	ENSDORP00000003361	Calreticulin.	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.	0.948
Clgn	Ankrd45	ENSDORP00000000159	ENSDORP00000003906	Calmegin.	Ankyrin repeat domain-containing protein 45 isoform X1.	0.932
Clgn	Calr4	ENSDORP00000000159	ENSDORP00000024217	Calmegin.	Calreticulin.	0.877
Clgn	Dnajc10	ENSDORP00000000159	ENSDORP00000004102	Calmegin.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.861
Clgn	Hsp90b1	ENSDORP00000000159	ENSDORP00000005189	Calmegin.	Endoplasmin.	0.942
Clgn	Pdia4	ENSDORP00000000159	ENSDORP00000004442	Calmegin.	Protein disulfide-isomerase A4.	0.842
Clgn	Pdia6	ENSDORP00000000159	ENSDORP00000003361	Calmegin.	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.	0.706
Dnajc10	Ankrd45	ENSDORP00000004102	ENSDORP00000003906	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Ankyrin repeat domain-containing protein 45 isoform X1.	0.990
Dnajc10	Calr4	ENSDORP00000004102	ENSDORP00000024217	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Calreticulin.	0.852