STRINGSTRING
Yes1 Yes1 Rapgef1 Rapgef1 Cass4 Cass4 Ptk2b Ptk2b Tgfb1i1 Tgfb1i1 Lpxn Lpxn Ptk2 Ptk2 Crkl Crkl Crk Crk Nedd9 Nedd9 Bcar1 Bcar1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Yes1Tyrosine-protein kinase. (541 aa)
Rapgef1Rap guanine nucleotide exchange factor 1 isoform X1. (1198 aa)
Cass4Cas scaffolding protein family member 4. (743 aa)
Ptk2bProtein-tyrosine kinase 2-beta isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1009 aa)
Tgfb1i1Transforming growth factor beta-1-induced transcript 1 protein; Belongs to the paxillin family. (462 aa)
LpxnLeupaxin; Belongs to the paxillin family. (386 aa)
Ptk2Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1072 aa)
CrklCrk-like protein. (303 aa)
CrkAdapter molecule crk. (304 aa)
Nedd9Enhancer of filamentation 1 isoform X3. (834 aa)
Bcar1Breast cancer anti-estrogen resistance protein 1 isoform X1. (931 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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