27 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Lrrc7	Leucine-rich repeat-containing protein 7. (1514 aa)
	Grin2b	Glutamate receptor ionotropic, NMDA 2B. (1103 aa)
	Grin2c	Glutamate receptor ionotropic, NMDA 2C. (1021 aa)
	Apba3	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1. (574 aa)
	Camk2g	Calcium/calmodulin-dependent protein kinase type II subunit gamma. (515 aa)
	Lin7b	Protein lin-7 homolog B. (204 aa)
	Dlg2	Disks large homolog 2 isoform X3. (870 aa)
	Grin2a	Glutamate receptor ionotropic, NMDA 2A. (1301 aa)
	Grin3a	Glutamate receptor ionotropic, NMDA 3A isoform X1. (1134 aa)
	Cask	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family. (927 aa)
	Lin7a	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (233 aa)
	Camk2b	Calcium/calmodulin-dependent protein kinase type II subunit beta. (644 aa)
	ENSDORP00000016358	annotation not available (337 aa)
	Apba2	Amyloid beta A4 precursor protein-binding family A member 2. (750 aa)
	Lin7c	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)
	Mpp1	55 kDa erythrocyte membrane protein; Belongs to the MAGUK family. (466 aa)
	Calm1	Calmodulin 1. (149 aa)
	Camk2a	Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1; Belongs to the protein kinase superfamily. (488 aa)
	Scrib	Protein scribble homolog. (1608 aa)
	Mpp2	MAGUK p55 subfamily member 2; Belongs to the MAGUK family. (569 aa)
	Camk2d	Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1; Belongs to the protein kinase superfamily. (533 aa)
	Mpp6	MAGUK p55 subfamily member 6 isoform X1; Belongs to the MAGUK family. (553 aa)
	Grin2d	Glutamate receptor, ionotropic, NMDA2D (epsilon 4). (1128 aa)
	Dlg5	Disks large homolog 5; Belongs to the MAGUK family. (263 aa)
	Dlg4	Disks large homolog 4; Belongs to the MAGUK family. (657 aa)
	Grin1	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1. (926 aa)
	Grin3b	Glutamate receptor ionotropic, NMDA 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (933 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apba2	Camk2a	ENSDORP00000016486	ENSDORP00000017802	Amyloid beta A4 precursor protein-binding family A member 2.	Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.853
Apba2	Camk2b	ENSDORP00000016486	ENSDORP00000015425	Amyloid beta A4 precursor protein-binding family A member 2.	Calcium/calmodulin-dependent protein kinase type II subunit beta.	0.853
Apba2	Camk2d	ENSDORP00000016486	ENSDORP00000021024	Amyloid beta A4 precursor protein-binding family A member 2.	Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1; Belongs to the protein kinase superfamily.	0.853
Apba2	Cask	ENSDORP00000016486	ENSDORP00000012401	Amyloid beta A4 precursor protein-binding family A member 2.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.999
Apba2	Dlg2	ENSDORP00000016486	ENSDORP00000009784	Amyloid beta A4 precursor protein-binding family A member 2.	Disks large homolog 2 isoform X3.	0.644
Apba2	Dlg4	ENSDORP00000016486	ENSDORP00000022410	Amyloid beta A4 precursor protein-binding family A member 2.	Disks large homolog 4; Belongs to the MAGUK family.	0.644
Apba2	Dlg5	ENSDORP00000016486	ENSDORP00000021888	Amyloid beta A4 precursor protein-binding family A member 2.	Disks large homolog 5; Belongs to the MAGUK family.	0.674
Apba2	Grin1	ENSDORP00000016486	ENSDORP00000022623	Amyloid beta A4 precursor protein-binding family A member 2.	LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1.	0.448
Apba2	Lin7a	ENSDORP00000016486	ENSDORP00000013497	Amyloid beta A4 precursor protein-binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.754
Apba2	Lin7b	ENSDORP00000016486	ENSDORP00000009609	Amyloid beta A4 precursor protein-binding family A member 2.	Protein lin-7 homolog B.	0.754
Apba2	Lin7c	ENSDORP00000016486	ENSDORP00000016828	Amyloid beta A4 precursor protein-binding family A member 2.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.754
Apba2	Mpp1	ENSDORP00000016486	ENSDORP00000016924	Amyloid beta A4 precursor protein-binding family A member 2.	55 kDa erythrocyte membrane protein; Belongs to the MAGUK family.	0.920
Apba2	Mpp2	ENSDORP00000016486	ENSDORP00000020994	Amyloid beta A4 precursor protein-binding family A member 2.	MAGUK p55 subfamily member 2; Belongs to the MAGUK family.	0.862
Apba2	Mpp6	ENSDORP00000016486	ENSDORP00000021556	Amyloid beta A4 precursor protein-binding family A member 2.	MAGUK p55 subfamily member 6 isoform X1; Belongs to the MAGUK family.	0.862
Apba3	Camk2a	ENSDORP00000004980	ENSDORP00000017802	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.853
Apba3	Camk2b	ENSDORP00000004980	ENSDORP00000015425	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Calcium/calmodulin-dependent protein kinase type II subunit beta.	0.853
Apba3	Camk2d	ENSDORP00000004980	ENSDORP00000021024	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1; Belongs to the protein kinase superfamily.	0.853
Apba3	Cask	ENSDORP00000004980	ENSDORP00000012401	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.999
Apba3	Dlg2	ENSDORP00000004980	ENSDORP00000009784	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Disks large homolog 2 isoform X3.	0.644
Apba3	Dlg4	ENSDORP00000004980	ENSDORP00000022410	Amyloid beta A4 precursor protein-binding family A member 3 isoform X1.	Disks large homolog 4; Belongs to the MAGUK family.	0.644