STRINGSTRING
Hdac1 Hdac1 Mbd4 Mbd4 Phf12 Phf12 Mta1 Mta1 Arid3c Arid3c Chd8 Chd8 Sap30l Sap30l Arid4a Arid4a Zbtb7a Zbtb7a Chd7 Chd7 Suds3 Suds3 Mta2 Mta2 Mbd3 Mbd3 Brms1l Brms1l Brms1 Brms1 Sinhcaf Sinhcaf Emsy Emsy Znf219 Znf219 Zfp292 Zfp292 Chd3 Chd3 Sin3a Sin3a Rcor2 Rcor2 Arid3b Arid3b Rcor3 Rcor3 1700125H20Rik 1700125H20Rik Hdac2 Hdac2 Gatad2b Gatad2b Znf521 Znf521 Wdr73 Wdr73 Ing2 Ing2 Sap130 Sap130 Hdac5 Hdac5 Rcor1 Rcor1 Hmg20a Hmg20a Chd5 Chd5 Zfp644 Zfp644 Rbbp4 Rbbp4 Sin3b Sin3b Cdk2ap2 Cdk2ap2 Gatad2a Gatad2a Snai2 Snai2 LOC105984045 LOC105984045 ENSDORP00000018862 ENSDORP00000018862 Sap30 Sap30 Arid3a Arid3a Rest Rest Phf21a Phf21a Kdm1a Kdm1a Chd4 Chd4 ENSDORP00000021583 ENSDORP00000021583 Ccdc96 Ccdc96 Hdac4 Hdac4 Arid4b Arid4b Gatad1 Gatad1 Morf4l2 Morf4l2 Adnp Adnp ENSDORP00000022774 ENSDORP00000022774 Chd6 Chd6 Ing1 Ing1 Hdac9 Hdac9 Mta3 Mta3 Mbd2 Mbd2 Snai1 Snai1 Tox2 Tox2 Hmg20b Hmg20b Ankra2 Ankra2 Cdk2ap1 Cdk2ap1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hdac1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (477 aa)
Mbd4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (457 aa)
Phf12PHD finger protein 12 isoform X1. (1004 aa)
Mta1Metastasis-associated protein MTA1. (704 aa)
Arid3cAT-rich interactive domain-containing protein 3C. (412 aa)
Chd8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2478 aa)
Sap30lHistone deacetylase complex subunit SAP30L. (186 aa)
Arid4aAT-rich interactive domain-containing protein 4A. (1214 aa)
Zbtb7aZinc finger and BTB domain-containing protein 7A. (560 aa)
Chd7chromodomain-helicase-DNA-binding protein 7 isoform X1. (2995 aa)
Suds3Sin3 histone deacetylase corepressor complex component SDS3. (304 aa)
Mta2Metastasis-associated protein MTA2. (561 aa)
Mbd3methyl-CpG-binding domain protein 3 isoform X2. (254 aa)
Brms1lBreast cancer metastasis-suppressor 1-like protein isoform X2. (308 aa)
Brms1Breast cancer metastasis-suppressor 1. (275 aa)
SinhcafProtein FAM60A. (210 aa)
EmsyProtein EMSY isoform X1. (1263 aa)
Znf219Zinc finger protein 219. (725 aa)
Zfp292Zinc finger protein 292. (2693 aa)
Chd3chromodomain-helicase-DNA-binding protein 3. (1964 aa)
Sin3aPaired amphipathic helix protein Sin3a. (1274 aa)
Rcor2REST corepressor 2. (523 aa)
Arid3bAT-rich interactive domain-containing protein 3B isoform X1. (548 aa)
Rcor3REST corepressor 3. (536 aa)
1700125H20RikUncharacterized protein C17orf64 homolog. (225 aa)
Hdac2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (488 aa)
Gatad2bTranscriptional repressor p66-beta isoform X1. (593 aa)
Znf521Zinc finger protein 521. (1311 aa)
Wdr73WD repeat-containing protein 73. (355 aa)
Ing2Inhibitor of growth protein. (174 aa)
Sap130Histone deacetylase complex subunit SAP130. (983 aa)
Hdac5Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1119 aa)
Rcor1REST corepressor 1. (320 aa)
Hmg20aHigh mobility group protein 20A. (347 aa)
Chd5chromodomain-helicase-DNA-binding protein 5. (1928 aa)
Zfp644Zinc finger protein 644 isoform X1. (1307 aa)
Rbbp4Histone-binding protein RBBP4. (425 aa)
Sin3bPaired amphipathic helix protein Sin3b. (1013 aa)
Cdk2ap2Cyclin-dependent kinase 2-associated protein; Belongs to the CDK2AP family. (127 aa)
Gatad2aTranscriptional repressor p66-alpha isoform X1. (623 aa)
Snai2Zinc finger protein SNAI2. (261 aa)
LOC105984045TOX high mobility group box family member 4-like. (550 aa)
ENSDORP00000018862annotation not available (27 aa)
Sap30Histone deacetylase complex subunit SAP30. (118 aa)
Arid3aAT-rich interactive domain-containing protein 3A isoform X2. (608 aa)
RestRE1-silencing transcription factor isoform X2. (329 aa)
Phf21aPHD finger protein 21A isoform X1. (636 aa)
Kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (755 aa)
Chd4chromodomain-helicase-DNA-binding protein 4 isoform X2. (1942 aa)
ENSDORP00000021583annotation not available (209 aa)
Ccdc96Coiled-coil domain-containing protein 96. (345 aa)
Hdac4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1062 aa)
Arid4bAT-rich interactive domain-containing protein 4B. (1311 aa)
Gatad1GATA zinc finger domain-containing protein 1. (54 aa)
Morf4l2Mortality factor 4-like protein 2. (288 aa)
AdnpActivity-dependent neuroprotector homeobox protein. (1098 aa)
ENSDORP00000022774annotation not available (389 aa)
Chd6chromodomain-helicase-DNA-binding protein 6. (546 aa)
Ing1Inhibitor of growth protein. (77 aa)
Hdac9Histone deacetylase 9 isoform X4. (114 aa)
Mta3Metastasis-associated protein MTA3. (576 aa)
Mbd2methyl-CpG-binding domain protein 2. (365 aa)
Snai1Zinc finger protein SNAI1. (240 aa)
Tox2TOX high mobility group box family member 2. (523 aa)
Hmg20bHigh mobility group 20B. (164 aa)
Ankra2Ankyrin repeat family A protein 2. (283 aa)
Cdk2ap1Cyclin-dependent kinase 2-associated protein 1. (87 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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