STRINGSTRING
Traf7 Traf7 Ubl4b Ubl4b Optn Optn Ripk4 Ripk4 Ubqln5 Ubqln5 Mib2 Mib2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Traf7E3 ubiquitin-protein ligase TRAF7 isoform X3. (670 aa)
Ubl4bUbiquitin-like protein 4B. (176 aa)
OptnOptineurin isoform X1. (570 aa)
Ripk4Receptor-interacting serine/threonine-protein kinase 4. (804 aa)
Ubqln5Ubiquilin-3. (505 aa)
Mib2E3 ubiquitin-protein ligase MIB2. (904 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.