33 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Arhgap6	Rho GTPase-activating protein 6. (465 aa)
	Bcl6	B-cell lymphoma 6 protein. (706 aa)
	Nexmif	Protein KIAA2022 homolog. (1492 aa)
	Mmp12	Macrophage metalloelastase. (403 aa)
	Jag1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
	Rcc2	Protein RCC2. (427 aa)
	Enpp2	Ectonucleotide pyrophosphatase/phosphodiesterase family member 2. (915 aa)
	Clasp2	CLIP-associating protein 2. (1255 aa)
	Ajap1	Adherens junction-associated protein 1. (407 aa)
	Rasa1	Ras GTPase-activating protein 1. (813 aa)
	Dlc1	Rho GTPase-activating protein 7 isoform X1. (1125 aa)
	Mmp14	Matrix metalloproteinase-14. (584 aa)
	Thbs1	Thrombospondin-1. (1173 aa)
	Adam15	Disintegrin and metalloproteinase domain-containing protein 15 isoform X1. (864 aa)
	Lrp1	Prolow-density lipoprotein receptor-related protein 1. (4543 aa)
	Acer2	Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (275 aa)
	Dusp22	Dual specificity protein phosphatase 22 isoform X1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (205 aa)
	Hoxa7	Homeobox protein Hox-A7. (237 aa)
	Pik3r1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (724 aa)
	Apod	Apolipoprotein D. (189 aa)
	Sema3e	semaphorin-3E; Belongs to the semaphorin family. (775 aa)
	Bcas3	Breast carcinoma-amplified sequence 3 isoform X4. (928 aa)
	Acvrl1	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (503 aa)
	Itgb1bp1	Integrin beta-1-binding protein 1. (200 aa)
	Coro1c	coronin-1C. (451 aa)
	Cask	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family. (927 aa)
	Dmtn	Dematin. (403 aa)
	Nf1	Neurofibromin isoform X1. (2841 aa)
	Phldb2	Pleckstrin homology-like domain family B member 2 isoform X1. (1254 aa)
	Serpine1	Plasminogen activator inhibitor 1 isoform X2; Belongs to the serpin family. (401 aa)
	Postn	Periostin. (672 aa)
	Pten	Phosphatase and tensin homolog. (396 aa)
	Fam107a	Protein FAM107A. (144 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acvrl1	Cask	ENSDORP00000015178	ENSDORP00000012401	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.571
Acvrl1	Rasa1	ENSDORP00000015178	ENSDORP00000001339	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Ras GTPase-activating protein 1.	0.412
Adam15	Rasa1	ENSDORP00000024091	ENSDORP00000001339	Disintegrin and metalloproteinase domain-containing protein 15 isoform X1.	Ras GTPase-activating protein 1.	0.736
Arhgap6	Pik3r1	ENSDORP00000006671	ENSDORP00000020150	Rho GTPase-activating protein 6.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.402
Cask	Acvrl1	ENSDORP00000012401	ENSDORP00000015178	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.571
Cask	Jag1	ENSDORP00000012401	ENSDORP00000004948	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.595
Cask	Pik3r1	ENSDORP00000012401	ENSDORP00000020150	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.415
Cask	Thbs1	ENSDORP00000012401	ENSDORP00000026378	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	Thrombospondin-1.	0.595
Clasp2	Phldb2	ENSDORP00000002248	ENSDORP00000010567	CLIP-associating protein 2.	Pleckstrin homology-like domain family B member 2 isoform X1.	0.585
Coro1c	Rcc2	ENSDORP00000012556	ENSDORP00000004756	coronin-1C.	Protein RCC2.	0.494
Dlc1	Rasa1	ENSDORP00000000255	ENSDORP00000001339	Rho GTPase-activating protein 7 isoform X1.	Ras GTPase-activating protein 1.	0.927
Dusp22	Lrp1	ENSDORP00000022568	ENSDORP00000023869	Dual specificity protein phosphatase 22 isoform X1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Prolow-density lipoprotein receptor-related protein 1.	0.500
Jag1	Cask	ENSDORP00000004948	ENSDORP00000012401	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.	0.595
Jag1	Mmp14	ENSDORP00000004948	ENSDORP00000000129	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Matrix metalloproteinase-14.	0.415
Jag1	Pik3r1	ENSDORP00000004948	ENSDORP00000020150	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.413
Lrp1	Dusp22	ENSDORP00000023869	ENSDORP00000022568	Prolow-density lipoprotein receptor-related protein 1.	Dual specificity protein phosphatase 22 isoform X1; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.500
Lrp1	Pik3r1	ENSDORP00000023869	ENSDORP00000020150	Prolow-density lipoprotein receptor-related protein 1.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.429
Lrp1	Serpine1	ENSDORP00000023869	ENSDORP00000010108	Prolow-density lipoprotein receptor-related protein 1.	Plasminogen activator inhibitor 1 isoform X2; Belongs to the serpin family.	0.603
Lrp1	Thbs1	ENSDORP00000023869	ENSDORP00000026378	Prolow-density lipoprotein receptor-related protein 1.	Thrombospondin-1.	0.562
Mmp12	Mmp14	ENSDORP00000004960	ENSDORP00000000129	Macrophage metalloelastase.	Matrix metalloproteinase-14.	0.708