STRINGSTRING
Tgfb2 Tgfb2 Tbx1 Tbx1 Nol3 Nol3 Lif Lif Ccr2 Ccr2 Fgf8 Fgf8 Epas1 Epas1 Bak1 Bak1 Nos3 Nos3 Atg5 Atg5 Hoxa3 Hoxa3 Axl Axl ENSDORP00000020340 ENSDORP00000020340 Foxc1 Foxc1 Sema3c Sema3c Rspo3 Rspo3 Fgf10 Fgf10 Ahr Ahr Acvr2b Acvr2b Eln Eln Bmpr2 Bmpr2 Tgfbr3 Tgfbr3 Dll4 Dll4 Ednra Ednra Bax Bax Dbh Dbh Acvrl1 Acvrl1 LOC106000842 LOC106000842 Flna Flna Mef2c Mef2c Atp7a Atp7a Itga4 Itga4 Cbs Cbs Chd7 Chd7 Jag1 Jag1 Rbpj Rbpj Nfatc3 Nfatc3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (443 aa)
Tbx1T-box transcription factor TBX1. (254 aa)
Nol3Nucleolar protein 3. (226 aa)
LifLeukemia inhibitory factor. (202 aa)
Ccr2C-C chemokine receptor type 2; Belongs to the G-protein coupled receptor 1 family. (367 aa)
Fgf8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (233 aa)
Epas1Endothelial PAS domain-containing protein 1 isoform X2. (877 aa)
Bak1Bcl-2 homologous antagonist/killer. (211 aa)
Nos3Nitric oxide synthase; Produces nitric oxide (NO). (1201 aa)
Atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
Hoxa3Homeobox protein Hox-A3. (442 aa)
AxlTyrosine-protein kinase receptor UFO. (858 aa)
ENSDORP00000020340annotation not available (258 aa)
Foxc1Forkhead box protein C1. (476 aa)
Sema3csemaphorin-3C; Belongs to the semaphorin family. (752 aa)
Rspo3R-spondin-3. (275 aa)
Fgf10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (223 aa)
AhrAryl hydrocarbon receptor. (807 aa)
Acvr2bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (303 aa)
ElnElastin. (795 aa)
Bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (933 aa)
Tgfbr3Transforming growth factor beta receptor type 3. (789 aa)
Dll4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (706 aa)
EdnraEndothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (426 aa)
BaxApoptosis regulator BAX. (143 aa)
DbhDopamine beta-hydroxylase. (620 aa)
Acvrl1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (503 aa)
LOC106000842Autophagy protein 5 pseudogene. (184 aa)
Flnafilamin-A isoform X1. (2647 aa)
Mef2cMyocyte-specific enhancer factor 2C isoform X5. (483 aa)
Atp7aCopper-transporting ATPase 1. (1488 aa)
Itga4Integrin alpha-4; Belongs to the integrin alpha chain family. (1032 aa)
CbsCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (561 aa)
Chd7chromodomain-helicase-DNA-binding protein 7 isoform X1. (2995 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
RbpjRecombining binding protein suppressor of hairless isoform X1. (526 aa)
Nfatc3Nuclear factor of activated T-cells, cytoplasmic 3 isoform X1. (1077 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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