STRINGSTRING
Tbx20 Tbx20 Gata4 Gata4 Tgfb2 Tgfb2 Jag1 Jag1 Sema3c Sema3c Hand2 Hand2 Ppp1r13l Ppp1r13l Bmpr1a Bmpr1a Smarcd3 Smarcd3 Foxh1 Foxh1 Hand1 Hand1 Isl1 Isl1 Sox4 Sox4 Gata3 Gata3 Hey2 Hey2 Zfpm2 Zfpm2 Chd7 Chd7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tbx20T-box transcription factor TBX20. (442 aa)
Gata4Transcription factor GATA-4. (235 aa)
Tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (443 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
Sema3csemaphorin-3C; Belongs to the semaphorin family. (752 aa)
Hand2Heart- and neural crest derivatives-expressed protein 2. (217 aa)
Ppp1r13lrelA-associated inhibitor. (828 aa)
Bmpr1aReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
Smarcd3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3. (456 aa)
Foxh1Forkhead box protein H1. (368 aa)
Hand1Heart- and neural crest derivatives-expressed protein 1. (214 aa)
Isl1Insulin gene enhancer protein ISL-1 isoform X1. (349 aa)
Sox4Transcription factor SOX. (249 aa)
Gata3Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
Hey2Hairy/enhancer-of-split related with YRPW motif protein 2. (338 aa)
Zfpm2Zinc finger protein ZFPM2 isoform X1. (1151 aa)
Chd7chromodomain-helicase-DNA-binding protein 7 isoform X1. (2995 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
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