7 items (Dipodomys ordii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Msrb1	methionine-R-sulfoxide reductase B1. (96 aa)
	Msra	Mitochondrial peptide methionine sulfoxide reductase isoform X1. (236 aa)
	Dnajc10	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins. (793 aa)
	Msrb2	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (153 aa)
	Msrb3	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (184 aa)
	Pdia3	Protein disulfide-isomerase. (505 aa)
	Txndc12	Thioredoxin domain-containing protein 12 isoform X1. (172 aa)

Your Current Organism:

Dipodomys ordii

NCBI taxonomy Id: 10020
Other names: D. ordii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dnajc10	Msra	ENSDORP00000004102	ENSDORP00000003814	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	0.908
Dnajc10	Msrb1	ENSDORP00000004102	ENSDORP00000024587	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	methionine-R-sulfoxide reductase B1.	0.650
Dnajc10	Msrb2	ENSDORP00000004102	ENSDORP00000007177	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.650
Dnajc10	Msrb3	ENSDORP00000004102	ENSDORP00000008484	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.650
Dnajc10	Pdia3	ENSDORP00000004102	ENSDORP00000013563	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Protein disulfide-isomerase.	0.767
Dnajc10	Txndc12	ENSDORP00000004102	ENSDORP00000021270	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	Thioredoxin domain-containing protein 12 isoform X1.	0.427
Msra	Dnajc10	ENSDORP00000003814	ENSDORP00000004102	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.908
Msra	Msrb1	ENSDORP00000003814	ENSDORP00000024587	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	methionine-R-sulfoxide reductase B1.	0.830
Msra	Msrb2	ENSDORP00000003814	ENSDORP00000007177	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.945
Msra	Msrb3	ENSDORP00000003814	ENSDORP00000008484	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.980
Msra	Pdia3	ENSDORP00000003814	ENSDORP00000013563	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	Protein disulfide-isomerase.	0.826
Msrb1	Dnajc10	ENSDORP00000024587	ENSDORP00000004102	methionine-R-sulfoxide reductase B1.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.650
Msrb1	Msra	ENSDORP00000024587	ENSDORP00000003814	methionine-R-sulfoxide reductase B1.	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	0.830
Msrb1	Msrb2	ENSDORP00000024587	ENSDORP00000007177	methionine-R-sulfoxide reductase B1.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.554
Msrb1	Pdia3	ENSDORP00000024587	ENSDORP00000013563	methionine-R-sulfoxide reductase B1.	Protein disulfide-isomerase.	0.516
Msrb2	Dnajc10	ENSDORP00000007177	ENSDORP00000004102	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.650
Msrb2	Msra	ENSDORP00000007177	ENSDORP00000003814	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	Mitochondrial peptide methionine sulfoxide reductase isoform X1.	0.945
Msrb2	Msrb1	ENSDORP00000007177	ENSDORP00000024587	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	methionine-R-sulfoxide reductase B1.	0.554
Msrb2	Pdia3	ENSDORP00000007177	ENSDORP00000013563	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	Protein disulfide-isomerase.	0.516
Msrb3	Dnajc10	ENSDORP00000008484	ENSDORP00000004102	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	DnaJ homolog subfamily C member 10; Endoplasmic reticulum disulfide reductase involved both in the correct folding of proteins and degradation of misfolded proteins.	0.650