STRINGSTRING
Fam207a Fam207a Nob1 Nob1 Rpf1 Rpf1 ENSDORP00000000639 ENSDORP00000000639 Las1l Las1l Nop14 Nop14 Nol10 Nol10 Eif6 Eif6 Rrp1 Rrp1 Bms1 Bms1 Pwp2 Pwp2 Rrp15 Rrp15 Ftsj3 Ftsj3 Prkdc Prkdc Heatr1 Heatr1 Utp11 Utp11 Mdn1 Mdn1 Rrp1b Rrp1b Fbl Fbl Utp23 Utp23 Mphosph10 Mphosph10 Nol6 Nol6 Tbl3 Tbl3 Ebna1bp2 Ebna1bp2 Riok1 Riok1 Utp25 Utp25 Rrp9 Rrp9 Utp14a Utp14a Emg1 Emg1 Fcf1 Fcf1 Ltv1 Ltv1 Imp4 Imp4 Bysl Bysl Xrcc5 Xrcc5 Riok3 Riok3 Rrp36 Rrp36 Nop9 Nop9 Nsa2 Nsa2 Rsl1d1 Rsl1d1 Noc2l Noc2l Nop56 Nop56 Utp20 Utp20 Utp4 Utp4 Wdr12 Wdr12 Mak16 Mak16 Rrp7a Rrp7a Riok2 Riok2 Tsr1 Tsr1 Pes1 Pes1 Ngdn Ngdn Ppan Ppan Wdr3 Wdr3 Wdr36 Wdr36 Utp23-2 Utp23-2 Utp6 Utp6 Utp3 Utp3 Snu13 Snu13 Wdr46 Wdr46 Imp3 Imp3 Znf622 Znf622 Wdr74 Wdr74 Pdcd11 Pdcd11 Rrs1 Rrs1 ENSDORP00000021284 ENSDORP00000021284 Noc4l Noc4l ENSDORP00000021864 ENSDORP00000021864 Krr1 Krr1 ENSDORP00000022305 ENSDORP00000022305 Mrto4 Mrto4 Hunk Hunk Utp18 Utp18 LOC105993916 LOC105993916 Rps7 Rps7 Bop1 Bop1 ENSDORP00000024657 ENSDORP00000024657 Dcaf13 Dcaf13 ENSDORP00000026414 ENSDORP00000026414 Nip7 Nip7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Fam207aProtein FAM207A. (172 aa)
Nob1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (408 aa)
Rpf1Ribosome production factor 1. (350 aa)
ENSDORP00000000639annotation not available (126 aa)
Las1lRibosomal biogenesis protein LAS1L isoform X3. (786 aa)
Nop14Nucleolar protein 14. (815 aa)
Nol10Nucleolar protein 10. (664 aa)
Eif6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
Rrp1Ribosomal RNA processing protein 1 homolog A. (412 aa)
Bms1Ribosome biogenesis protein BMS1 homolog isoform X1. (1276 aa)
Pwp2Periodic tryptophan protein 2 homolog. (897 aa)
Rrp15RRP15-like protein. (273 aa)
Ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (832 aa)
PrkdcDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4088 aa)
Heatr1HEAT repeat-containing protein 1. (1863 aa)
Utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (237 aa)
Mdn1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5541 aa)
Rrp1bRibosomal RNA processing protein 1 homolog B isoform X1. (662 aa)
FblrRNA 2'-O-methyltransferase fibrillarin. (308 aa)
Utp23UTP23 small subunit processome component. (143 aa)
Mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (675 aa)
Nol6Nucleolar protein 6. (1144 aa)
Tbl3Transducin beta-like protein 3. (805 aa)
Ebna1bp2Probable rRNA-processing protein EBP2. (198 aa)
Riok1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (570 aa)
Utp25Digestive organ expansion factor homolog. (621 aa)
Rrp9U3 small nucleolar RNA-interacting protein 2. (478 aa)
Utp14aU3 small nucleolar RNA-associated protein 14 homolog A. (773 aa)
Emg1EMG1 N1-specific pseudouridine methyltransferase. (232 aa)
Fcf1rRNA-processing protein FCF1 homolog isoform X1. (193 aa)
Ltv1Protein LTV1 homolog. (469 aa)
Imp4U3 small nucleolar ribonucleoprotein protein IMP4. (291 aa)
ByslBystin. (436 aa)
Xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (692 aa)
Riok3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
Rrp36Ribosomal RNA processing protein 36 homolog. (229 aa)
Nop9Nucleolar protein 9. (639 aa)
Nsa2Ribosome biogenesis protein NSA2 homolog. (254 aa)
Rsl1d1Ribosomal L1 domain-containing protein 1. (400 aa)
Noc2lNucleolar complex protein 2 homolog isoform X2. (718 aa)
Nop56Nucleolar protein 56. (261 aa)
Utp20Small subunit processome component 20 homolog. (2721 aa)
Utp4Cirhin. (686 aa)
Wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (401 aa)
Mak16Protein MAK16 homolog; Belongs to the MAK16 family. (298 aa)
Rrp7aRibosomal RNA-processing protein 7 homolog A. (279 aa)
Riok2Serine/threonine-protein kinase RIO2 isoform X1. (538 aa)
Tsr1pre-rRNA-processing protein TSR1 homolog. (803 aa)
Pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (601 aa)
NgdnNeuroguidin. (313 aa)
PpanSuppressor of SWI4 1 homolog. (344 aa)
Wdr3WD repeat-containing protein 3 isoform X2. (951 aa)
Wdr36WD repeat-containing protein 36 isoform X1. (898 aa)
Utp23-2rRNA-processing protein UTP23 homolog. (259 aa)
Utp6U3 small nucleolar RNA-associated protein 6 homolog. (569 aa)
Utp3Something about silencing protein 10. (475 aa)
Snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
Wdr46WD repeat-containing protein 46. (611 aa)
Imp3U3 small nucleolar ribonucleoprotein protein IMP3. (184 aa)
Znf622Zinc finger protein 622. (476 aa)
Wdr74WD repeat-containing protein 74. (341 aa)
Pdcd11Protein RRP5 homolog isoform X2. (1857 aa)
Rrs1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (264 aa)
ENSDORP00000021284annotation not available (297 aa)
Noc4lNucleolar complex protein 4 homolog. (518 aa)
ENSDORP00000021864annotation not available (84 aa)
Krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (378 aa)
ENSDORP00000022305annotation not available (242 aa)
Mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
HunkHormonally up-regulated neu tumor-associated kinase. (686 aa)
Utp18U3 small nucleolar RNA-associated protein 18 homolog. (464 aa)
LOC105993916U3 small nucleolar RNA-associated protein 14 homolog A-like. (735 aa)
Rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (169 aa)
Bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (734 aa)
ENSDORP00000024657annotation not available (319 aa)
Dcaf13LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13. (438 aa)
ENSDORP00000026414annotation not available (722 aa)
Nip760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
Your Current Organism:
Dipodomys ordii
NCBI taxonomy Id: 10020
Other names: D. ordii
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.